RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 ZNF180Q9UJW8 692 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 DENND2AQ9ULE3 1009 aa7.43□□□□□ -1.22
MARK3-220ENST00000560417 N4BP3O15049 544 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 SEMA7AO75326 666 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
MARK3-220ENST00000560417 PFKLP17858 780 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 AGXTP21549 392 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 IRAK1P51617 712 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 MRPS9P82933 396 aaKnown RBP7.42□□□□□ -1.22
MARK3-220ENST00000560417 ADCY2Q08462 1091 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 RTP5Q14D33 572 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 UGT8Q16880 541 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 KANK2Q63ZY3 851 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 NXNQ6DKJ4 435 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 CMTR2Q8IYT2 770 aaKnown RBP7.42□□□□□ -1.22
MARK3-220ENST00000560417 CHPFQ8IZ52 775 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 SSH1Q8WYL5 1049 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 C8orf48Q96LL4 319 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 GORASP1Q9BQQ3 440 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 PITHD1Q9GZP4 211 aaPredicted RBP7.42□□□□□ -1.22
MARK3-220ENST00000560417 PRDM12Q9H4Q4 367 aa7.42□□□□□ -1.22
MARK3-220ENST00000560417 LUC7LQ9NQ29 371 aaKnown RBP7.42□□□□□ -1.22
MARK3-220ENST00000560417 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 SNUPNO95149 360 aaKnown RBP7.41□□□□□ -1.22
MARK3-220ENST00000560417 CCND1P24385 295 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
MARK3-220ENST00000560417 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.41□□□□□ -1.22
MARK3-220ENST00000560417 FAM102BQ5T8I3 360 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 CCDC62Q6P9F0 684 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 PNMA8AQ86V59 439 aaPredicted RBP7.41□□□□□ -1.22
MARK3-220ENST00000560417 TCEAL8Q8IYN2 117 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 JPH3Q8WXH2 748 aaPredicted RBP7.41□□□□□ -1.22
MARK3-220ENST00000560417 JADE3Q92613 823 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 FERMT2Q96AC1 680 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 OR10A5Q9H207 317 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 KCND1Q9NSA2 647 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 ARHGAP20Q9P2F6 1191 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 IP6K2Q9UHH9 426 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 MRFAP1Q9Y605 127 aa7.41□□□□□ -1.22
MARK3-220ENST00000560417 ZRANB2O95218 330 aaKnown RBP eCLIP7.4□□□□□ -1.22
MARK3-220ENST00000560417 APOL3O95236 402 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 LPLP06858 475 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
MARK3-220ENST00000560417 EPHB3P54753 998 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 BCAR1P56945 870 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 IL13RA1P78552 427 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 SRSF2Q01130 221 aaKnown RBP7.4□□□□□ -1.22
MARK3-220ENST00000560417 TRIM25Q14258 630 aaKnown RBP7.4□□□□□ -1.22
MARK3-220ENST00000560417 TOR2AQ5JU69 321 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 TTLL7Q6ZT98 887 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 RELTQ969Z4 430 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 RAX2Q96IS3 184 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 TEKT5Q96M29 485 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 C11orf84Q9BUA3 381 aaPredicted RBP7.4□□□□□ -1.22
MARK3-220ENST00000560417 SGPP1Q9BX95 441 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 HAPLN2Q9GZV7 340 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 DNAJC28Q9NX36 388 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 PNMA8BQ9ULN7 279 aaPredicted RBP7.4□□□□□ -1.22
MARK3-220ENST00000560417 MYPNQ86TC9 1320 aa7.4□□□□□ -1.22
MARK3-220ENST00000560417 HTRA3P83110 453 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 FOXO4P98177 505 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 MLANAQ16655 118 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 NOL8Q76FK4 1167 aaKnown RBP7.39□□□□□ -1.23
MARK3-220ENST00000560417 CXXC5Q7LFL8 322 aaKnown RBP7.39□□□□□ -1.23
MARK3-220ENST00000560417 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 KYQ8NBH2 561 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 RSAD2Q8WXG1 361 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 NOX5Q96PH1 765 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 QRSL1Q9H0R6 528 aaKnown RBP7.39□□□□□ -1.23
MARK3-220ENST00000560417 KCTD10Q9H3F6 313 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 MTG2Q9H4K7 406 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 GEMIN8Q9NWZ8 242 aaKnown RBP7.39□□□□□ -1.23
MARK3-220ENST00000560417 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 ZFP69BQ9UJL9 534 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 EDARQ9UNE0 448 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 ANKRD6Q9Y2G4 727 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 GIT1Q9Y2X7 761 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 GPR45Q9Y5Y3 372 aa7.39□□□□□ -1.23
MARK3-220ENST00000560417 A0A0A6YYJ9 748 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 ST20-MTHFSA0A0A6YYL1 179 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 PRPF3O43395 683 aaKnown RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 XPOTO43592 962 aaKnown RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 OPHN1O60890 802 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 CELA3BP08861 270 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 MTHFD2P13995 350 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 TAL1P17542 331 aaPredicted RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 MUM1Q2TAK8 710 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 PHF19Q5T6S3 580 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 EFCAB2Q5VUJ9 269 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 STK32CQ86UX6 486 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 FBXO15Q8NCQ5 510 aaPredicted RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 AUTS2Q8WXX7 1259 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 NUP88Q99567 741 aaPredicted RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 TACO1Q9BSH4 297 aaKnown RBP7.38□□□□□ -1.23
MARK3-220ENST00000560417 INVSQ9Y283 1065 aa7.38□□□□□ -1.23
MARK3-220ENST00000560417 COL6A1P12109 1028 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms