RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 PCDHA5Q9Y5H7 936 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 FRMD3A2A2Y4 597 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 HBP1O60381 514 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 INSRRP14616 1297 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 BMP6P22004 513 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 MARK3P27448 753 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 PSEN2P49810 448 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 SLC26A2P50443 739 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 FAM160B1Q5W0V3 765 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
HERC1-206ENST00000559996 CXCL17Q6UXB2 119 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 DDX12PQ92771 950 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 GLG1Q92896 1179 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 FIZ1Q96SL8 496 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 PYM1Q9BRP8 204 aaKnown RBP10.45□□□□□ -0.74
HERC1-206ENST00000559996 TSEN34Q9BSV6 310 aaKnown RBP10.45□□□□□ -0.74
HERC1-206ENST00000559996 RNF208Q9H0X6 261 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 BLZF1Q9H2G9 400 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 DHX33Q9H6R0 707 aaKnown RBP10.45□□□□□ -0.74
HERC1-206ENST00000559996 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 CYP26B1Q9NR63 512 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 NRBP2Q9NSY0 501 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 ERAP1Q9NZ08 941 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 TUBE1Q9UJT0 475 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
HERC1-206ENST00000559996 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
HERC1-206ENST00000559996 KPNA6O60684 536 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 DKC1O60832 514 aaKnown RBP eCLIP10.44□□□□□ -0.74
HERC1-206ENST00000559996 SGPL1O95470 568 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
HERC1-206ENST00000559996 GJB1P08034 283 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 MYL3P08590 195 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 SOX10P56693 466 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 DHX8Q14562 1220 aaKnown RBP10.44□□□□□ -0.74
HERC1-206ENST00000559996 MFSD10Q14728 455 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 POSTNQ15063 836 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 XKR9Q5GH70 373 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 OTUD6AQ7L8S5 288 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 CEP57L1Q8IYX8 460 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 SLC43A3Q8NBI5 491 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 CDK5RAP3Q96JB5 506 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 CEP170P1Q96L14 293 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 DEFB118Q96PH6 123 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 FUCA2Q9BTY2 467 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 MAGEF1Q9HAY2 307 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
HERC1-206ENST00000559996 TRIP12Q14669 1992 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 ARID2Q68CP9 1835 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 MBLAC1A4D2B0 266 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 RSPH10B2B2RC85 870 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 KINO60870 393 aaKnown RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 MAFO75444 373 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 C22orf31O95567 290 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 RSPH10BP0C881 870 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 SMIM10L2AP0DMW4 78 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 SMIM10L2BP0DMW5 78 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 GUCY2CP25092 1073 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 GJA8P48165 433 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 ZNF131P52739 623 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 ACLYP53396 1101 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 ZNF200P98182 395 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 DRP2Q13474 957 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 MTERF2Q49AM1 385 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 ZNF484Q5JVG2 852 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 CCDC183Q5T5S1 534 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 DYMQ7RTS9 669 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 RNF180Q86T96 592 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 U2AF1L4Q8WU68 220 aaKnown RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 REEP2Q9BRK0 252 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 MTG1Q9BT17 334 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 NUP62CLQ9H1M0 184 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
HERC1-206ENST00000559996 PHF24Q9UPV7 400 aa10.43□□□□□ -0.74
HERC1-206ENST00000559996 PVALEFA0A1B0GWK0 134 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 ARHGEF35A5YM69 484 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 MOXD2PA6NHM9 499 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 HIP1RO75146 1068 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 DGAT1O75907 488 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 MYL1P05976 194 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 COL6A1P12109 1028 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 KLRC1P26715 233 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 ARL2P36404 184 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 CDK7P50613 346 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms