RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KCND2Q9NZV8 630 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 COL1A2P08123 1366 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 DGAT1O75907 488 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 ASGR1P07306 291 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 CCDC192P0DO97 292 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 GUCY2CP25092 1073 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 CST5P28325 142 aaPredicted RBP11.57□□□□□ -0.56
TPM1-221ENST00000559831 RFC5P40937 340 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 SARSP49591 514 aaKnown RBP11.57□□□□□ -0.56
TPM1-221ENST00000559831 SOX10P56693 466 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 NLRP12P59046 1061 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 NKX3-2P78367 333 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 TYRO3Q06418 890 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 COASYQ13057 564 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 TARBP2Q15633 366 aaKnown RBP11.57□□□□□ -0.56
TPM1-221ENST00000559831 GRIK4Q16099 956 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 STX1AQ16623 288 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 ZNF484Q5JVG2 852 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 CNNM4Q6P4Q7 775 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 VTI1AQ96AJ9 217 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 GPRC5CQ9NQ84 441 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 TBC1D7Q9P0N9 293 aa11.57□□□□□ -0.56
TPM1-221ENST00000559831 PVALEFA0A1B0GWK0 134 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 ZBTB42B2RXF5 422 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 KBTBD13C9JR72 458 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 HAS3O00219 553 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 GAP43P17677 238 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 MORC3Q14149 939 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 KCNB1Q14721 858 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 HERC4Q5GLZ8 1057 aaPredicted RBP11.56□□□□□ -0.56
TPM1-221ENST00000559831 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 NT5DC1Q5TFE4 455 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SFR1Q86XK3 245 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 MYCT1Q8N699 235 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 METTL13Q8N6R0 699 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 ARRDC4Q8NCT1 418 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 MCPH1Q8NEM0 835 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SLC7A3Q8WY07 619 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 HPS3Q969F9 1004 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 ZBTB10Q96DT7 871 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 ZNF333Q96JL9 665 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 DRC1Q96MC2 740 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 TIPINQ9BVW5 301 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 POLR3FQ9H1D9 316 aaPredicted RBP11.56□□□□□ -0.56
TPM1-221ENST00000559831 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SUGCTQ9HAC7 445 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 PARVGQ9HBI0 331 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
TPM1-221ENST00000559831 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 SETD4Q9NVD3 440 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 ODF2LQ9ULJ1 636 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 COL4A3BPQ9Y5P4 624 aa11.56□□□□□ -0.56
TPM1-221ENST00000559831 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 RRN3P2A6NIE6 340 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 MAFO75444 373 aaPredicted RBP11.55□□□□□ -0.56
TPM1-221ENST00000559831 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 ACLYP53396 1101 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 ZNF445P59923 1031 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 MAPK7Q13164 816 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 CCSAPQ6IQ19 270 aaPredicted RBP11.55□□□□□ -0.56
TPM1-221ENST00000559831 EXOC8Q8IYI6 725 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 SMYD4Q8IYR2 804 aaPredicted RBP11.55□□□□□ -0.56
TPM1-221ENST00000559831 LRRC71Q8N4P6 559 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 TRIML1Q8N9V2 468 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 TMEM143Q96AN5 459 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 FUCA2Q9BTY2 467 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 DHX33Q9H6R0 707 aaKnown RBP11.55□□□□□ -0.56
TPM1-221ENST00000559831 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 GDAQ9Y2T3 454 aa11.55□□□□□ -0.56
TPM1-221ENST00000559831 C17orf102A2RUQ5 167 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 MOXD2PA6NHM9 499 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 MAGEB2O15479 319 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 C22orf31O95567 290 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 KLRC1P26715 233 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 CLCN3P51790 818 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 DPCR1Q3MIW9 517 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 ANO6Q4KMQ2 910 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 ODR4Q5SWX8 454 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 L1TD1Q5T7N2 865 aaKnown RBP11.54□□□□□ -0.56
TPM1-221ENST00000559831 ZNF658Q5TYW1 1059 aaPredicted RBP11.54□□□□□ -0.56
TPM1-221ENST00000559831 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 DAW1Q8N136 415 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms