RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 CAPN11Q9UMQ6 739 aa13.98□□□□□ -0.17
USP3-213ENST00000559711 ZMYM2Q9UBW7 1377 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 GSTTP1A0A1W2PQM5 241 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 ASB14A6NK59 587 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 RASSF10A6NK89 507 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 PRKCEQ02156 737 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 SP4Q02446 784 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 METTL7BQ6UX53 244 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 MAEAQ7L5Y9 396 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 SLC17A8Q8NDX2 589 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 ZNF526Q8TF50 670 aaPredicted RBP13.97□□□□□ -0.17
USP3-213ENST00000559711 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 PARK7Q99497 189 aaKnown RBP13.97□□□□□ -0.17
USP3-213ENST00000559711 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 SIK3Q9Y2K2 1263 aa13.97□□□□□ -0.17
USP3-213ENST00000559711 TTC26A0AVF1 554 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 SLC16A3O15427 465 aaKnown RBP13.96□□□□□ -0.17
USP3-213ENST00000559711 DGAT1O75907 488 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 NR3C1P04150 777 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 ATP4AP20648 1035 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 HUNKP57058 714 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 GTF2BQ00403 316 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 CCDC62Q6P9F0 684 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 GOLGA5Q8TBA6 731 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 TMEM174Q8WUU8 243 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 KIFAP3Q92845 792 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 GBP3Q9H0R5 595 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 DMAC2Q9NW81 257 aa13.96□□□□□ -0.17
USP3-213ENST00000559711 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
USP3-213ENST00000559711 A0A1W2PQJ5 194 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 USP27XA6NNY8 438 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 SORBS3O60504 671 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 ARIH2O95376 493 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 GGPS1O95749 300 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 KRT9P35527 623 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 RTP1P59025 263 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 PPP2R3AQ06190 1150 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 MYBPC2Q14324 1141 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 LY6KQ17RY6 165 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 SLC9A9Q8IVB4 645 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 OR8K1Q8NGG5 319 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 AFAP1L1Q8TED9 768 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 SEPT1Q8WYJ6 367 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 PCYT2Q99447 389 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 TMEM206Q9H813 350 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 METTL14Q9HCE5 456 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 ARMCX3Q9UH62 379 aaPredicted RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP3-213ENST00000559711 K7ENM7 598 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 CLIC2O15247 247 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 AKAP3O75969 853 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 OATP04181 439 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 ADORA2AP29274 412 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 TMTC1Q8IUR5 882 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 KSR1Q8IVT5 923 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 SPIRE2Q8WWL2 714 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 MKNK1Q9BUB5 465 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 AGPAT3Q9NRZ7 376 aa13.95□□□□□ -0.18
USP3-213ENST00000559711 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
USP3-213ENST00000559711 CCP110O43303 1012 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 EPB41P11171 864 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 KLK7P49862 253 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 SNRPFP62306 86 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 ZBED6P86452 979 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 CEP89Q96ST8 783 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 IKZF4Q9H2S9 585 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 XPNPEP1Q9NQW7 623 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 DIS3Q9Y2L1 958 aaKnown RBP13.94□□□□□ -0.18
USP3-213ENST00000559711 LOXHD1Q8IVV2 1947 aa13.94□□□□□ -0.18
USP3-213ENST00000559711 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 PSMC2P35998 433 aaKnown RBP13.93□□□□□ -0.18
USP3-213ENST00000559711 NPTX2P47972 431 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms