RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 COASYQ13057 564 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ALCAMQ13740 583 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 LIN9Q5TKA1 542 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 SLFN12LQ6IEE8 588 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 FBXO16Q8IX29 292 aaPredicted RBP11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 SELENOOQ9BVL4 669 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 CTTNBP2NLQ9P2B4 639 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 FAM184BQ9ULE4 1060 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 JRKLQ9Y4A0 524 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 MSH4O15457 936 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 SLC37A4O43826 429 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 EGFRP00533 1210 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 PSMC4P43686 418 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 MYL7Q01449 175 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ZRSR2Q15696 482 aaKnown RBP11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 PLA2G4FQ68DD2 849 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 KIAA1841Q6NSI8 718 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 MED10Q9BTT4 135 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ADAM21Q9UKJ8 722 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 AGTPBP1Q9UPW5 1226 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 KBTBD13C9JR72 458 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 HIP1RO75146 1068 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 CTSHP09668 335 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 NAA25Q14CX7 972 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 SARM1Q6SZW1 724 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 SRGAP1Q7Z6B7 1085 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PRDM5Q9NQX1 630 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 HESX1Q9UBX0 185 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ABL1P00519 1130 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 MXI1P50539 228 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 INHBEP58166 350 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 TNNC1P63316 161 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 LAMC2Q13753 1193 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ZNF568Q3ZCX4 644 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 FAM71BQ8TC56 605 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 BCAS4Q8TDM0 211 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 WDR18Q9BV38 432 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 NUCKS1Q9H1E3 243 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 FAM204AQ9H8W3 233 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 RWDD2AQ9UIY3 292 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ANKRD65E5RJM6 399 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 STRNO43815 780 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 AFPP02771 609 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 SNX16P57768 344 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ERVK-9P63128 1117 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ERVK-24P63145 666 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PRKCEQ02156 737 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PPARDQ03181 441 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 HAUS6Q7Z4H7 955 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 GPRASP2Q96D09 838 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 GCOM2Q9BZD3 368 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 DGAT1O75907 488 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 PRCPP42785 496 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 ACTR2P61160 394 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 GRIN1Q05586 938 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 TMEM62Q0P6H9 643 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 E2F4Q16254 413 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 U2AF1L4Q8WU68 220 aaKnown RBP11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
CARMIL3-202ENST00000559694 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 ABCB4P21439 1286 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 SREBF1P36956 1147 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 LRRC63Q05C16 580 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 NOGQ13253 232 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 HOOK3Q86VS8 718 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 HPS3Q969F9 1004 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 SUCLA2Q9P2R7 463 aaPredicted RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 CDC23Q9UJX2 597 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 AFDNP55196 1824 aaKnown RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 TRIM49BA6NDI0 452 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 IKBKBO14920 756 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms