RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 ODF2LQ9ULJ1 636 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 COL4A3BPQ9Y5P4 624 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 RBAK-RBAKDNI3L0D1 243 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 PRPF6O94906 941 aaKnown RBP19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 PSMD2Q13200 908 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 KIF22Q14807 665 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 TARBP2Q15633 366 aaKnown RBP19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 COBLL1Q53SF7 1204 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 EPM2AIP1Q7L775 607 aaPredicted RBP19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 OTUD6AQ7L8S5 288 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 P2RX5Q93086 422 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 C16orf70Q9BSU1 422 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 KIFC3Q9BVG8 833 aa19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 MRPL44Q9H9J2 332 aaKnown RBP19.18■□□□□ 0.66
CHRNA3-206ENST00000559658 PSMA7O14818 248 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 NKRFO15226 690 aaKnown RBP eCLIP19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 DKC1O60832 514 aaKnown RBP eCLIP19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 ZNF18P17022 549 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 DRP2Q13474 957 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 EMC2Q15006 297 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 ODR4Q5SWX8 454 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 SPATA1Q5VX52 437 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 GUF1Q8N442 669 aaKnown RBP19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 NIFKQ9BYG3 293 aaKnown RBP19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 SRRDQ9UH36 339 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 ZMYM2Q9UBW7 1377 aa19.17■□□□□ 0.66
CHRNA3-206ENST00000559658 MYADML2A6NDP7 307 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 GCNT3O95395 438 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 ADCY5O95622 1261 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 BEX3Q00994 111 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 CACNB2Q08289 660 aaPredicted RBP19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 PTPN21Q16825 1174 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 PLPPR4Q7Z2D5 763 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 MYOCDQ8IZQ8 938 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 ATP8B4Q8TF62 1192 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 TMEM143Q96AN5 459 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 OLFML3Q9NRN5 406 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 HOXD8P13378 290 aaPredicted RBP19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 GAP43P17677 238 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 CCNE1P24864 410 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 STIM1Q13586 685 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 DHTKD1Q96HY7 919 aaPredicted RBP19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 SMARCAD1Q9H4L7 1026 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 DHX33Q9H6R0 707 aaKnown RBP19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 ATP6V0A4Q9HBG4 840 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 TRPC6Q9Y210 931 aa19.16■□□□□ 0.66
CHRNA3-206ENST00000559658 ADGRA3Q8IWK6 1321 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 DGAT1O75907 488 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 POLGP54098 1239 aaPredicted RBP19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 CDKAL1Q5VV42 579 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 CENPPQ6IPU0 288 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 IRF2BP1Q8IU81 584 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 FAM178BQ8IXR5 827 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 BBXQ8WY36 941 aaPredicted RBP19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 KCTD10Q9H3F6 313 aa19.15■□□□□ 0.66
CHRNA3-206ENST00000559658 PLS3P13797 630 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 HSPA6P17066 643 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 PEX3P56589 373 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 CT47A1Q5JQC4 288 aaPredicted RBP19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 ASAP3Q8TDY4 903 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 POLR3FQ9H1D9 316 aaPredicted RBP19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 A6NJR5 290 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 K7ENM7 598 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 PPP1R37O75864 691 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 PRKAR2AP13861 404 aaKnown RBP19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 MKRN4PQ13434 485 aaPredicted RBP19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 MFSD14CQ5VZR4 134 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 ZNF720Q7Z2F6 126 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 LRRC71Q8N4P6 559 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 ERAP1Q9NZ08 941 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 FAM184BQ9ULE4 1060 aa19.14■□□□□ 0.65
CHRNA3-206ENST00000559658 EVPLQ92817 2033 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 SLC16A4O15374 487 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 FKTNO75072 461 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 AKR1A1P14550 325 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 CNGA1P29973 690 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 IGBP1P78318 339 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 IRF5Q13568 498 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 SARM1Q6SZW1 724 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 APTXQ7Z2E3 356 aaKnown RBP19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 KAT2BQ92831 832 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 FAM167AQ96KS9 214 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 DRC1Q96MC2 740 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 STRA6Q9BX79 667 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 TRIM5Q9C035 493 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 NRBP2Q9NSY0 501 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 INTS13Q9NVM9 706 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 SAGE1Q9NXZ1 904 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 IFNKQ9P0W0 207 aa19.13■□□□□ 0.65
CHRNA3-206ENST00000559658 H3BRB1 525 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 ADCY3O60266 1144 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 PPFIA4O75335 1185 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 GJB1P08034 283 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 NPTX2P47972 431 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 ZNF75DP51815 510 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 CHMP4BP1P59074 171 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms