RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 MRIQ9BWK5 157 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 ALDH8A1Q9H2A2 487 aaPredicted RBP8.07□□□□□ -1.12
ZEB1-216ENST00000559496 RNF41Q9H4P4 317 aaPredicted RBP8.07□□□□□ -1.12
ZEB1-216ENST00000559496 CNNM2Q9H8M5 875 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 MCM9Q9NXL9 1143 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 ANAPC4Q9UJX5 808 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 ADAMTS6Q9UKP5 1117 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 NEDD4P46934 1319 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 LAMB1P07942 1786 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 ADAMTSL1Q8N6G6 1762 aa8.07□□□□□ -1.12
ZEB1-216ENST00000559496 CDK5RAP2Q96SN8 1893 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 B4E1Z4 1266 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 PRC1O43663 620 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 PGRP06401 933 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 SLC3A2P08195 630 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 VIL1P09327 827 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 ZNF865P0CJ78 1059 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CYP2D6P10635 497 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CAPN2P17655 700 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 RBM5P52756 815 aaKnown RBP eCLIP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 PDE4BQ07343 736 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 IKZF1Q13422 519 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 TOB2Q14106 344 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 SBK1Q52WX2 424 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 RRP12Q5JTH9 1297 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 SLC6A19Q695T7 634 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CIAPIN1Q6FI81 312 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 Q6ZUG5 572 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CHST3Q7LGC8 479 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 GAS2L3Q86XJ1 694 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 PHC3Q8NDX5 983 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CRELD1Q96HD1 420 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 ZSCAN31Q96LW9 406 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-216ENST00000559496 ZDHHC15Q96MV8 337 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 SYT17Q9BSW7 474 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 LRRC2Q9BYS8 371 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 KRT23Q9C075 422 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 TOMM22Q9NS69 142 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 USP40Q9NVE5 1235 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 CEP83Q9Y592 693 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 FLT1P17948 1338 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 WDR19Q8NEZ3 1342 aa8.06□□□□□ -1.12
ZEB1-216ENST00000559496 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
ZEB1-216ENST00000559496 PCP11498 1178 aaKnown RBP8.05□□□□□ -1.12
ZEB1-216ENST00000559496 ANTXR2P58335 489 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 CXCL9Q07325 125 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 CUL4AQ13619 759 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 TNIP1Q15025 636 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 CFAP100Q494V2 611 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
ZEB1-216ENST00000559496 CDC42EP5Q6NZY7 148 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 POU5F2Q8N7G0 328 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 AGBL3Q8NEM8 1001 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 ANKRD7Q92527 254 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 BRF1Q92994 677 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 GMLQ99445 158 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 INCENPQ9NQS7 918 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 RBM28Q9NW13 759 aaKnown RBP8.05□□□□□ -1.12
ZEB1-216ENST00000559496 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 SAP30BPQ9UHR5 308 aaKnown RBP8.05□□□□□ -1.12
ZEB1-216ENST00000559496 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 TPCN1Q9ULQ1 816 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 PITPNM2Q9BZ72 1349 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 FOCADQ5VW36 1801 aa8.05□□□□□ -1.12
ZEB1-216ENST00000559496 PRR33A8MZF0 331 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 SMIM22K7EJ46 135 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 KIF1CO43896 1103 aaKnown RBP8.04□□□□□ -1.12
ZEB1-216ENST00000559496 WDHD1O75717 1129 aaPredicted RBP8.04□□□□□ -1.12
ZEB1-216ENST00000559496 LARGE1O95461 756 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 EIF6P56537 245 aaKnown RBP8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ZNF445P59923 1031 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 TAGLNQ01995 201 aaKnown RBP8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ZP2Q05996 745 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 PICALMQ13492 652 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ME3Q16798 604 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 SLC4A8Q2Y0W8 1093 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 DDX60LQ5H9U9 1706 aaKnown RBP8.04□□□□□ -1.12
ZEB1-216ENST00000559496 C12orf60Q5U649 245 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 CYB5R4Q7L1T6 521 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 FBXL16Q8N461 479 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 MFSD4AQ8N468 514 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 LRRN4CLQ8ND94 238 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ESR2Q92731 530 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 COX4I2Q96KJ9 171 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 AGXT2Q9BYV1 514 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 MYH1P12882 1939 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ECM29Q5VYK3 1845 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 ROBO3Q96MS0 1386 aa8.04□□□□□ -1.12
ZEB1-216ENST00000559496 FZD9O00144 591 aa8.03□□□□□ -1.12
ZEB1-216ENST00000559496 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
ZEB1-216ENST00000559496 IFIT3O14879 490 aaKnown RBP8.03□□□□□ -1.12
ZEB1-216ENST00000559496 ORC4O43929 436 aa8.03□□□□□ -1.12
ZEB1-216ENST00000559496 PRDM1O75626 825 aa8.03□□□□□ -1.12
ZEB1-216ENST00000559496 FGRP09769 529 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms