RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 SEPT2Q15019 361 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 LONRF1Q17RB8 773 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 DCUN1D2Q6PH85 259 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 HOOK2Q96ED9 719 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 ZNF512BQ96KM6 892 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 LBHD1Q9BQE6 289 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 PITPNM3Q9BZ71 974 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 CCSER1Q9C0I3 900 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 ISCUQ9H1K1 167 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 TMBIM4Q9HC24 238 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 ZNF148Q9UQR1 794 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 KDM6AO15550 1401 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 TMEM94Q12767 1356 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 PLS3P13797 630 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 SIK1P57059 783 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 TTI2Q6NXR4 508 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 ADGRA1Q86SQ6 560 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 CFAP61Q8NHU2 1237 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 SPZ1Q9BXG8 430 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 BHMT2Q9H2M3 363 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 FAM205AQ6ZU69 1335 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L15C9J2P7 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L13C9JLJ4 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L11C9JVI0 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L18D6R9N7 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L22D6RA61 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L17D6RBQ6 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L19D6RCP7 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L20D6RJB6 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 STXBP3O00186 592 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 SPAG7O75391 227 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 HOXA13P31271 388 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 SCTRP47872 440 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L24Q0WX57 530 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 USP17L6PQ6QN14 398 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 SEMA6BQ9H3T3 888 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 SLITRK6Q9H5Y7 841 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 BSDC1Q9NW68 430 aaPredicted RBP7.66□□□□□ -1.18
USP3-210ENST00000559192 TACC3Q9Y6A5 838 aa7.66□□□□□ -1.18
USP3-210ENST00000559192 TCRBV5S4A2TA0A5A2 114 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 ENO4A6NNW6 628 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 TTLL1O95922 423 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CYP19A1P11511 503 aaPredicted RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 TRPC3Q13507 836 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 GJB7Q6PEY0 223 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 FBXO11Q86XK2 927 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CTAGE3PQ8IX95 158 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 P3H4Q92791 437 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CEP95Q96GE4 821 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 ERGIC2Q96RQ1 377 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 OSBPL1AQ9BXW6 950 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 Q9H521 79 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 NOD2Q9HC29 1040 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 FAM53CQ9NYF3 392 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 MINPP1Q9UNW1 487 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 EXOC7Q9UPT5 735 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 JCADQ9P266 1359 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 C3P01024 1663 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 EXOC1LA0A1B0GW35 172 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 EVI5O60447 810 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 MAP3K7CLP57077 242 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 IRX4P78413 519 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SATB1Q01826 763 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CAPRIN2Q6IMN6 1127 aaKnown RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 SPICE1Q8N0Z3 855 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SLC35G2Q8TBE7 412 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SH3GL3Q99963 347 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 HEMGNQ9BXL5 484 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 DDX20Q9UHI6 824 aaKnown RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 SCINQ9Y6U3 715 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 GOLGA8IPA6NC78 632 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 GOLGA8JA6NMD2 632 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 ORC4O43929 436 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SKAP2O75563 359 aaPredicted RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 TNNI1P19237 187 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SLC9A1P19634 815 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 PCYT1AP49585 367 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 PTK2Q05397 1052 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 DRAP1Q14919 205 aaPredicted RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 CCDC137Q6PK04 289 aaKnown RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 PPP4R3CPQ6ZMV5 832 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CREG2Q8IUH2 290 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 SUGP1Q8IWZ8 645 aaKnown RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 C1orf54Q8WWF1 131 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 CELF1Q92879 486 aaKnown RBP7.65□□□□□ -1.18
USP3-210ENST00000559192 CAVIN3Q969G5 261 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
USP3-210ENST00000559192 PNMA6FA0A0J9YX94 578 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SSU72P8A0A1W2PR75 194 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SGK1O00141 431 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 RPS6KA5O75582 802 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 GNPTABQ3T906 1256 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 RBM26Q5T8P6 1007 aaKnown RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 AGBL2Q5U5Z8 902 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SLFN13Q68D06 897 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 ANKRD35Q8N283 1001 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms