RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC192P0DO97 292 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 CCL5P13501 91 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 BMP6P22004 513 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 EHHADHQ08426 723 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 MAPK7Q13164 816 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 LRSAM1Q6UWE0 723 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 DAW1Q8N136 415 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 PCSK9Q8NBP7 692 aaKnown RBP20.05■□□□□ 0.8
CLPX-203ENST00000558958 MCPH1Q8NEM0 835 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 CCDC47Q96A33 483 aaKnown RBP20.05■□□□□ 0.8
CLPX-203ENST00000558958 ATP6V0A4Q9HBG4 840 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 POLD4Q9HCU8 107 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 XPNPEP1Q9NQW7 623 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 EXOC1Q9NV70 894 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 COL1A2P08123 1366 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 HIP1RO75146 1068 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 TBCAO75347 108 aaKnown RBP20.05■□□□□ 0.8
CLPX-203ENST00000558958 MAFO75444 373 aaPredicted RBP20.05■□□□□ 0.8
CLPX-203ENST00000558958 ASGR1P07306 291 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 ZNF131P52739 623 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 POLGP54098 1239 aaPredicted RBP20.05■□□□□ 0.8
CLPX-203ENST00000558958 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 COASYQ13057 564 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 EMC2Q15006 297 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 ISM2Q6H9L7 571 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 CXCL17Q6UXB2 119 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 SLC7A3Q8WY07 619 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 ARMC5Q96C12 935 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 RNF208Q9H0X6 261 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 COL4A3BPQ9Y5P4 624 aa20.05■□□□□ 0.8
CLPX-203ENST00000558958 FAM13AO94988 1023 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 MYCP01106 439 aaPredicted RBP20.04■□□□□ 0.8
CLPX-203ENST00000558958 MYCNP04198 464 aaPredicted RBP20.04■□□□□ 0.8
CLPX-203ENST00000558958 NLRP12P59046 1061 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 PPFIA1Q13136 1202 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 STX1AQ16623 288 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 MAEAQ7L5Y9 396 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 EXOC8Q8IYI6 725 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 TRAPPC12Q8WVT3 735 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 TSEN34Q9BSV6 310 aaKnown RBP20.04■□□□□ 0.8
CLPX-203ENST00000558958 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
CLPX-203ENST00000558958 IGKV6-21A0A0C4DH24 114 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 SFI1A8K8P3 1242 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 SMIM10L2AP0DMW4 78 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 SMIM10L2BP0DMW5 78 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 GAP43P17677 238 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 PSMD2Q13200 908 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 GRIK4Q16099 956 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 HERC4Q5GLZ8 1057 aaPredicted RBP20.03■□□□□ 0.8
CLPX-203ENST00000558958 FAM102BQ5T8I3 360 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 ZNF658Q5TYW1 1059 aaPredicted RBP20.03■□□□□ 0.8
CLPX-203ENST00000558958 ARRDC4Q8NCT1 418 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 DEFB118Q96PH6 123 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 ZHX3Q9H4I2 956 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 PARVGQ9HBI0 331 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 GPRC5CQ9NQ84 441 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
CLPX-203ENST00000558958 NRCAMQ92823 1304 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 RRN3P2A6NIE6 340 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 GAS2O43903 313 aaKnown RBP20.02■□□□□ 0.8
CLPX-203ENST00000558958 C22orf31O95567 290 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 SOX10P56693 466 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 CHMP4BP1P59074 171 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 IGBP1P78318 339 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 DPCR1Q3MIW9 517 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 KIFAP3Q92845 792 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 HPS3Q969F9 1004 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 JPH2Q9BR39 696 aaPredicted RBP20.02■□□□□ 0.8
CLPX-203ENST00000558958 GTPBP4Q9BZE4 634 aaKnown RBP20.02■□□□□ 0.8
CLPX-203ENST00000558958 SEL1LQ9UBV2 794 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 PCDHA2Q9Y5H9 948 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.8
CLPX-203ENST00000558958 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 MOXD2PA6NHM9 499 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 MAGEB2O15479 319 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 CABYRO75952 493 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 KLRC1P26715 233 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 ACLYP53396 1101 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 STK4Q13043 487 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 FAM26FQ5R3K3 315 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 MARCH8Q5T0T0 291 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 SFR1Q86XK3 245 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 MYCT1Q8N699 235 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 LMBR1Q8WVP7 490 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 SETD4Q9NVD3 440 aa20.01■□□□□ 0.79
CLPX-203ENST00000558958 PLS3P13797 630 aa20■□□□□ 0.79
CLPX-203ENST00000558958 HOXC8P31273 242 aa20■□□□□ 0.79
CLPX-203ENST00000558958 ARL2P36404 184 aa20■□□□□ 0.79
CLPX-203ENST00000558958 RTP1P59025 263 aa20■□□□□ 0.79
CLPX-203ENST00000558958 NBPF20Q3BBV1 942 aa20■□□□□ 0.79
CLPX-203ENST00000558958 MTHFD1LQ6UB35 978 aa20■□□□□ 0.79
CLPX-203ENST00000558958 MLKLQ8NB16 471 aa20■□□□□ 0.79
CLPX-203ENST00000558958 PPP1R13LQ8WUF5 828 aa20■□□□□ 0.79
CLPX-203ENST00000558958 POLR3FQ9H1D9 316 aaPredicted RBP20■□□□□ 0.79
CLPX-203ENST00000558958 TSPY26PQ9H489 355 aa20■□□□□ 0.79
CLPX-203ENST00000558958 C17orf75Q9HAS0 396 aa20■□□□□ 0.79
CLPX-203ENST00000558958 SLC39A2Q9NP94 309 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 710.1 ms