RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 C11orf84Q9BUA3 381 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-203ENST00000558937 NRBP2Q9NSY0 501 aa17.03■□□□□ 0.32
SMAD6-203ENST00000558937 ORC3Q9UBD5 711 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-203ENST00000558937 DDX25Q9UHL0 483 aaKnown RBP17.03■□□□□ 0.32
SMAD6-203ENST00000558937 ST3GAL5Q9UNP4 418 aa17.03■□□□□ 0.32
SMAD6-203ENST00000558937 MRPL42Q9Y6G3 142 aaKnown RBP17.03■□□□□ 0.32
SMAD6-203ENST00000558937 REV3LO60673 3130 aa17.03■□□□□ 0.32
SMAD6-203ENST00000558937 MYO7AQ13402 2215 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 NCOR1O75376 2440 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 FNDC1Q4ZHG4 1894 aaPredicted RBP17.02■□□□□ 0.32
SMAD6-203ENST00000558937 SLC37A4O43826 429 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 GPR32O75388 356 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 XBP1P17861 261 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
SMAD6-203ENST00000558937 GATMP50440 423 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 LETM2Q2VYF4 491 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 PAN2Q504Q3 1202 aaKnown RBP17.02■□□□□ 0.32
SMAD6-203ENST00000558937 EFCAB12Q6NXP0 572 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 NECAB1Q8N987 351 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 BANK1Q8NDB2 785 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 OXER1Q8TDS5 423 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 ADAM2Q99965 735 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
SMAD6-203ENST00000558937 VCANP13611 3396 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-203ENST00000558937 GPR182O15218 404 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 GRM6O15303 877 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 TMOD1P28289 359 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 ME3Q16798 604 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 TCEAL5Q5H9L2 206 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 FAM43BQ6ZT52 329 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-203ENST00000558937 NEK8Q86SG6 692 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 LMAN2LQ9H0V9 348 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 NSUN3Q9H649 340 aaKnown RBP17.01■□□□□ 0.31
SMAD6-203ENST00000558937 C1orf112Q9NSG2 853 aa17.01■□□□□ 0.31
SMAD6-203ENST00000558937 SEPT9Q9UHD8 586 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-203ENST00000558937 DENND3A2RUS2 1198 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 TMEM150BA6NC51 233 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 C9IYK1 514 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 STBD1O95210 358 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
SMAD6-203ENST00000558937 NLRP11P59045 1033 aaKnown RBP17■□□□□ 0.31
SMAD6-203ENST00000558937 TBC1D8BQ0IIM8 1120 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 TARBP2Q15633 366 aaKnown RBP17■□□□□ 0.31
SMAD6-203ENST00000558937 MTERF2Q49AM1 385 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 ZNF668Q96K58 619 aaPredicted RBP17■□□□□ 0.31
SMAD6-203ENST00000558937 PLVAPQ9BX97 442 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 KCNMB3Q9NPA1 279 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 RGS18Q9NS28 235 aa17■□□□□ 0.31
SMAD6-203ENST00000558937 GCFC2P16383 781 aaKnown RBP16.99■□□□□ 0.31
SMAD6-203ENST00000558937 KCNA5P22460 613 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 GPC3P51654 580 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 DSC3Q14574 896 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 XKR3Q5GH77 459 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 EARS2Q5JPH6 523 aaKnown RBP16.99■□□□□ 0.31
SMAD6-203ENST00000558937 SLC24A5Q71RS6 500 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 WASF1Q92558 559 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 NIFKQ9BYG3 293 aaKnown RBP16.99■□□□□ 0.31
SMAD6-203ENST00000558937 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
SMAD6-203ENST00000558937 SPTBN5Q9NRC6 3674 aaKnown RBP16.99■□□□□ 0.31
SMAD6-203ENST00000558937 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 EML1O00423 815 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
SMAD6-203ENST00000558937 CSPG5O95196 566 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 SEC24BO95487 1268 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 MMP1P03956 469 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
SMAD6-203ENST00000558937 NEK4P51957 841 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 DRP2Q13474 957 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 LEXMQ3ZCV2 418 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 ZNF710Q8N1W2 664 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
SMAD6-203ENST00000558937 P2RX5Q93086 422 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 SH2D3AQ9BRG2 576 aa16.98■□□□□ 0.31
SMAD6-203ENST00000558937 ALG13Q9NP73 1137 aaKnown RBP16.98■□□□□ 0.31
SMAD6-203ENST00000558937 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 TBKBP1A7MCY6 615 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 CCNT1O60563 726 aaKnown RBP16.97■□□□□ 0.31
SMAD6-203ENST00000558937 ITGB1P05556 798 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
SMAD6-203ENST00000558937 KRT2P35908 639 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 PSMC5P62195 406 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 NR5A1Q13285 461 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 COL19A1Q14993 1142 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 TNFRSF25Q93038 417 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 PABPC5Q96DU9 382 aaKnown RBP16.97■□□□□ 0.31
SMAD6-203ENST00000558937 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
SMAD6-203ENST00000558937 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
SMAD6-203ENST00000558937 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
SMAD6-203ENST00000558937 TMEM161AQ9NX61 479 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms