RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
TPM1-216ENST00000558910 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 FAM184AQ8NB25 1140 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 SEPT8Q92599 483 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 CHD9Q3L8U1 2897 aa13.55□□□□□ -0.24
TPM1-216ENST00000558910 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 LCHNA4D1U4 455 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 WDR64B1ANS9 1081 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 M0QZ92 97 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 HBP1O60381 514 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 PTGDRQ13258 359 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
TPM1-216ENST00000558910 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 Q4G0T1 1027 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 NCAPH2Q6IBW4 605 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 TAF2Q6P1X5 1199 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
TPM1-216ENST00000558910 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 SLC17A8Q8NDX2 589 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 ARNTL2Q8WYA1 636 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 SLC9A7Q96T83 725 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 IFIH1Q9BYX4 1025 aaKnown RBP13.54□□□□□ -0.24
TPM1-216ENST00000558910 STXBP5LQ9Y2K9 1186 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
TPM1-216ENST00000558910 EYSQ5T1H1 3165 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 VTNP04004 478 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 CD52P31358 61 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 CLCN3P51790 818 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 MRPS6P82932 125 aaKnown RBP13.53□□□□□ -0.24
TPM1-216ENST00000558910 PRKCEQ02156 737 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
TPM1-216ENST00000558910 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
TPM1-216ENST00000558910 TNPO1Q92973 898 aaKnown RBP13.53□□□□□ -0.24
TPM1-216ENST00000558910 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
TPM1-216ENST00000558910 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
TPM1-216ENST00000558910 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 MBLAC1A4D2B0 266 aaPredicted RBP13.52□□□□□ -0.25
TPM1-216ENST00000558910 DDX11L8A8MPP1 907 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 WNT7AO00755 349 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 ZNF862O60290 1169 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 PSMD10O75832 226 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 CSPG5O95196 566 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 PARNO95453 639 aaKnown RBP13.52□□□□□ -0.25
TPM1-216ENST00000558910 MMP1P03956 469 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 AMHP03971 560 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 OATP04181 439 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 MGAT3Q09327 533 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.25
TPM1-216ENST00000558910 LPIN1Q14693 890 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 KIZQ2M2Z5 673 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 PLEKHG4Q58EX7 1191 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 ETNPPLQ8TBG4 499 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
TPM1-216ENST00000558910 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 RIT2Q99578 217 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 AKT3Q9Y243 479 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 TRPV2Q9Y5S1 764 aa13.52□□□□□ -0.25
TPM1-216ENST00000558910 GBF1Q92538 1859 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 CYP3A7-CYP3A51PA0A087WV96 503 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 EML1O00423 815 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 CD2BP2O95400 341 aaKnown RBP13.51□□□□□ -0.25
TPM1-216ENST00000558910 CYP3A7P24462 503 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 JAK3P52333 1124 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 RABEP1Q15276 862 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPM1-216ENST00000558910 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 IER5Q5VY09 327 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 AGO3Q9H9G7 860 aaKnown RBP13.51□□□□□ -0.25
TPM1-216ENST00000558910 NRBP2Q9NSY0 501 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
TPM1-216ENST00000558910 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
TPM1-216ENST00000558910 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 A0A087WWV3 80 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 SMIM35A0A1B0GVV1 85 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 ZBTB42B2RXF5 422 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 CAND2O75155 1236 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 SFNP31947 248 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 MCM7P33993 719 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
TPM1-216ENST00000558910 SLC26A2P50443 739 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 CYP4A11Q02928 519 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 PAK2Q13177 524 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms