RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MUTP22033 750 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 TMOD1P28289 359 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 MARCKSP29966 332 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 RARRES1P49788 294 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 HABP4Q5JVS0 413 aaKnown RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 FBXO47Q5MNV8 452 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 DBF4BQ8NFT6 615 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 ZNF396Q96N95 335 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 PPP1R16BQ96T49 567 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 CDHR5Q9HBB8 845 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-206ENST00000558471 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 PPME1Q9Y570 386 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 TCHHQ07283 1943 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 GPR32O75388 356 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 GHRP10912 638 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 RFC5P40937 340 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 LPIN1Q14693 890 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 KIZQ2M2Z5 673 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 SLC7A3Q8WY07 619 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 AGO3Q9H9G7 860 aaKnown RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 FBXO2Q9UK22 296 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 DBR1Q9UK59 544 aaKnown RBP13.94□□□□□ -0.18
LRRC28-206ENST00000558471 AKT3Q9Y243 479 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 GINS2Q9Y248 185 aa13.94□□□□□ -0.18
LRRC28-206ENST00000558471 MICAL3Q7RTP6 2002 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 ACTN1P12814 892 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 DNM2P50570 870 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 EMC2Q15006 297 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 EXOC8Q8IYI6 725 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 LINC00301Q8NCQ3 95 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 TMEM143Q96AN5 459 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 AK8Q96MA6 479 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 CLIC6Q96NY7 704 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 PNMA5Q96PV4 448 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 XPNPEP1Q9NQW7 623 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 SUCLA2Q9P2R7 463 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
LRRC28-206ENST00000558471 SQORQ9Y6N5 450 aa13.93□□□□□ -0.18
LRRC28-206ENST00000558471 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 ZBBXA8MT70 800 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 E9PMD0 336 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 DGAT1O75907 488 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 GPC3P51654 580 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-206ENST00000558471 GRB10Q13322 594 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 STK38Q15208 465 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
LRRC28-206ENST00000558471 LRIT3Q3SXY7 679 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 HYIQ5T013 277 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 CABP7Q86V35 215 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 KSR1Q8IVT5 923 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 USP38Q8NB14 1042 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 SEPT8Q92599 483 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 CCDC43Q96MW1 224 aaKnown RBP13.92□□□□□ -0.18
LRRC28-206ENST00000558471 PLIN2Q99541 437 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 OSMRQ99650 979 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 MTRQ99707 1265 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 IFIH1Q9BYX4 1025 aaKnown RBP13.92□□□□□ -0.18
LRRC28-206ENST00000558471 CSRNP2Q9H175 543 aa13.92□□□□□ -0.18
LRRC28-206ENST00000558471 MORC2Q9Y6X9 1032 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-206ENST00000558471 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 SPTLC2O15270 562 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 USO1O60763 962 aaKnown RBP13.91□□□□□ -0.18
LRRC28-206ENST00000558471 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 CD52P31358 61 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 DDIT3P35638 169 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 UBA7P41226 1012 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
LRRC28-206ENST00000558471 IKBKEQ14164 716 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms