RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CDY2AQ9Y6F7 541 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TRIP12Q14669 1992 aaPredicted RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 TCF20Q9UGU0 1960 aaKnown RBP9.5□□□□□ -0.89
TPM1-213ENST00000558400 GRXCR1A8MXD5 290 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 EML1O00423 815 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 GPR182O15218 404 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 SLITRK3O94933 977 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 LYPLA2O95372 231 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 C22orf31O95567 290 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 CRYBB1P53674 252 aaPredicted RBP9.5□□□□□ -0.89
TPM1-213ENST00000558400 WDR5P61964 334 aaKnown RBP9.5□□□□□ -0.89
TPM1-213ENST00000558400 PDIA5Q14554 519 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 TARBP2Q15633 366 aaKnown RBP9.5□□□□□ -0.89
TPM1-213ENST00000558400 ZNF174Q15697 407 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 TMEM266Q2M3C6 531 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 HERC6Q8IVU3 1022 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 TPH2Q8IWU9 490 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 ERMNQ8TAM6 284 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 SNX21Q969T3 373 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 RAD9AQ99638 391 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 HSD17B14Q9BPX1 270 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 RAB34Q9BZG1 259 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 SUGCTQ9HAC7 445 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 INSL6Q9Y581 213 aa9.5□□□□□ -0.89
TPM1-213ENST00000558400 IGKV6-21A0A0C4DH24 114 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 ENPP3O14638 875 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 TLL1O43897 1013 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 GAS2O43903 313 aaKnown RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 MAFO75444 373 aaPredicted RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 STBD1O95210 358 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 GJB5O95377 273 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 OR52Z1P0C646 297 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 GHRP10912 638 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 MUTP22033 750 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 YWHABP31946 246 aaKnown RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 SPIRE1Q08AE8 756 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 LPIN1Q14693 890 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 MTERF2Q49AM1 385 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 ANO5Q75V66 913 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 SLC7A3Q8WY07 619 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 TOP1MTQ969P6 601 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 CEP170P1Q96L14 293 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 EIF2AK1Q9BQI3 630 aaKnown RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 LXNQ9BS40 222 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 CYP26B1Q9NR63 512 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 ANKEF1Q9NU02 776 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
TPM1-213ENST00000558400 AKT3Q9Y243 479 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 DOCK5Q9H7D0 1870 aa9.49□□□□□ -0.89
TPM1-213ENST00000558400 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
TPM1-213ENST00000558400 ASAP2O43150 1006 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 GPR32O75388 356 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 EIF4BP23588 611 aaKnown RBP9.48□□□□□ -0.89
TPM1-213ENST00000558400 PBX2P40425 430 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 RFC5P40937 340 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 PRPHP41219 470 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 TECP42680 631 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 NLRP11P59045 1033 aaKnown RBP9.48□□□□□ -0.89
TPM1-213ENST00000558400 TMEM62Q0P6H9 643 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
TPM1-213ENST00000558400 PAK2Q13177 524 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 UGCGQ16739 394 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 MYOCDQ8IZQ8 938 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 LINC01465Q8N7H1 131 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 ADAMTS19Q8TE59 1207 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 TCP11Q8WWU5 503 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 DYDC2Q96IM9 177 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 NACC1Q96RE7 527 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 POLR3CQ9BUI4 534 aaPredicted RBP9.48□□□□□ -0.89
TPM1-213ENST00000558400 TMEM60Q9H2L4 133 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 TUFT1Q9NNX1 390 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 PADI3Q9ULW8 664 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 GINS2Q9Y248 185 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 MUC6Q6W4X9 2439 aa9.48□□□□□ -0.89
TPM1-213ENST00000558400 MYH9P35579 1960 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 BMP15O95972 392 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 VTNP04004 478 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 RPA1P27694 616 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 CD52P31358 61 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 TOB1P50616 345 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 CLCN3P51790 818 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 CLCN6P51797 869 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 RABGGTBP53611 331 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 POLGP54098 1239 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 PTGDRQ13258 359 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 CTTNQ14247 550 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 KIZQ2M2Z5 673 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 ARL6IP4Q66PJ3 421 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms