RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RASSF10A6NK89 507 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 FGGP02679 453 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 PSMC5P62195 406 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 AOC3Q16853 763 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ACCSQ96QU6 501 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 COG4Q9H9E3 785 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ATP10BO94823 1461 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 PLEKHA8P1O95397 391 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 HSPA8P11142 646 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 NME3Q13232 169 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 RNF207Q6ZRF8 634 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 NLRP14Q86W24 1093 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 SRRM1Q8IYB3 904 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 L3MBTL1Q9Y468 752 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 CARMIL3Q8ND23 1372 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 RNF103-CHMP3A0A140T963 221 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 CARSP49589 748 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 EIF3BP55884 814 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 GLYCTKQ8IVS8 523 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 OTULINQ96BN8 352 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 GMNCA6NCL1 334 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 MOCS2O96007 188 aaPredicted RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 LRRC36Q1X8D7 754 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 YIPF2Q9BWQ6 316 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 HEY1Q9Y5J3 304 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 PALMO75781 387 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 MECOMQ03112 1051 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 MSTO1Q9BUK6 570 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 APOBEC2Q9Y235 224 aaKnown RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 PCDHB6Q9Y5E3 794 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 XDHP47989 1333 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 NEMP1O14524 444 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 SERPING1P05155 500 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 BMP3P12645 472 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 TRPC1P48995 793 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 CDC37Q16543 378 aaPredicted RBP14.93□□□□□ -0.02
SPG11-210ENST00000558319 FAM83BQ5T0W9 1011 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 GSDMAQ96QA5 445 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
SPG11-210ENST00000558319 MAN2A1Q16706 1144 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ASCC2Q9H1I8 757 aaPredicted RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 RPF1Q9H9Y2 349 aaKnown RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 GTSE1Q9NYZ3 720 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 KIF17Q9P2E2 1029 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 STOML1Q9UBI4 398 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 TRAF3IP3Q9Y228 551 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 COPEO14579 308 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 PRPSAP2O60256 369 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 VCAM1P19320 739 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ARL4AP40617 200 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 FAM117BQ6P1L5 589 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 MIS12Q9H081 205 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ABCC4O15439 1325 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ERVV-2B6SEH9 535 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 IKBKBO14920 756 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 CENPUQ71F23 418 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 FAF2Q96CS3 445 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 GCNAQ96QF7 691 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 TTC7AQ9ULT0 858 aaPredicted RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 PPP6R2O75170 966 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 TTC25Q96NG3 672 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 LRRC37BQ96QE4 947 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 SLC12A6Q9UHW9 1150 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 TSC22D4Q9Y3Q8 395 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 CCDC157Q569K6 752 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 DTX3LQ8TDB6 740 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
SPG11-210ENST00000558319 ARHGAP26Q9UNA1 814 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 CCDC78A2IDD5 438 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 DAB1O75553 588 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 PLCG1P19174 1290 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 KRT26Q7Z3Y9 468 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 IL17RAQ96F46 866 aa14.92□□□□□ -0.02
SPG11-210ENST00000558319 ESYT3A0FGR9 886 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 DIAPH2O60879 1101 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 DDAH1O94760 285 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 PDE8BO95263 885 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 SLC39A14Q15043 492 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 CUL1Q13616 776 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 FRA10AC1Q70Z53 315 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 NDE1Q9NXR1 346 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 USP27XA6NNY8 438 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 PYGBP11216 843 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 CCNA1P78396 465 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 DHTKD1Q96HY7 919 aaPredicted RBP14.91□□□□□ -0.02
SPG11-210ENST00000558319 TMEM260Q9NX78 707 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms