RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FGD1P98174 961 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 SMRP1Q8NCR6 262 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 BRF1Q92994 677 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 LENG9Q96B70 501 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 PPP1R16BQ96T49 567 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 OSMRQ99650 979 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.48
SCFD1-224ENST00000557713 AAASQ9NRG9 546 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 TYW1Q9NV66 732 aaKnown RBP18.08■□□□□ 0.48
SCFD1-224ENST00000557713 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.48
SCFD1-224ENST00000557713 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 EDIL3O43854 480 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 GNA11P29992 359 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 NTRK3Q16288 839 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 PRR16Q569H4 304 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 SPOUT1Q5T280 376 aaKnown RBP18.07■□□□□ 0.48
SCFD1-224ENST00000557713 METTL13Q8N6R0 699 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 LINC01465Q8N7H1 131 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 CWH43Q9H720 699 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 TLE6Q9H808 572 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 ATP6V0A4Q9HBG4 840 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 HCSTQ9UBK5 93 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 GABBR1Q9UBS5 961 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 MUTYHQ9UIF7 546 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 SNX14Q9Y5W7 946 aa18.07■□□□□ 0.48
SCFD1-224ENST00000557713 FNDC1Q4ZHG4 1894 aaPredicted RBP18.07■□□□□ 0.48
SCFD1-224ENST00000557713 MAGEB2O15479 319 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 FGF18O76093 207 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 FGFR1P11362 822 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 HSPA4P34932 840 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 ERVFC1P60507 584 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 TRMT1LQ7Z2T5 733 aaKnown RBP18.06■□□□□ 0.48
SCFD1-224ENST00000557713 COLGALT1Q8NBJ5 622 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 RASGRP4Q8TDF6 673 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 PHKBQ93100 1093 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 JAKMIP1Q96N16 626 aaKnown RBP18.06■□□□□ 0.48
SCFD1-224ENST00000557713 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 TLR9Q9NR96 1032 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 BARX2Q9UMQ3 279 aaPredicted RBP18.06■□□□□ 0.48
SCFD1-224ENST00000557713 CEP131Q9UPN4 1083 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 EVPLQ92817 2033 aa18.06■□□□□ 0.48
SCFD1-224ENST00000557713 LOC730098B7Z3J9 87 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 FSCN2O14926 492 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 PER2O15055 1255 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 ZNF862O60290 1169 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 CLCN3P51790 818 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 EFCAB12Q6NXP0 572 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 HFE2Q6ZVN8 426 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 BICD2Q8TD16 824 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 EDAQ92838 391 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 FAM167AQ96KS9 214 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 KCNH6Q9H252 994 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 RNF19AQ9NV58 838 aa18.05■□□□□ 0.48
SCFD1-224ENST00000557713 USP15Q9Y4E8 981 aaPredicted RBP18.05■□□□□ 0.48
SCFD1-224ENST00000557713 WDR64B1ANS9 1081 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 MSH4O15457 936 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 NLRP11P59045 1033 aaKnown RBP18.04■□□□□ 0.48
SCFD1-224ENST00000557713 RBM10P98175 930 aaKnown RBP18.04■□□□□ 0.48
SCFD1-224ENST00000557713 CBX2Q14781 532 aaPredicted RBP18.04■□□□□ 0.48
SCFD1-224ENST00000557713 DUSP6Q16828 381 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 PDE12Q6L8Q7 609 aaKnown RBP18.04■□□□□ 0.48
SCFD1-224ENST00000557713 LRRC55Q6ZSA7 311 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 THNSL1Q8IYQ7 743 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 CASD1Q96PB1 797 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 RNF26Q9BY78 433 aaPredicted RBP18.04■□□□□ 0.48
SCFD1-224ENST00000557713 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 DISC1Q9NRI5 854 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 NRBP2Q9NSY0 501 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 TCEAL9Q9UHQ7 104 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 LZTS1Q9Y250 596 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 SAMM50Q9Y512 469 aa18.04■□□□□ 0.48
SCFD1-224ENST00000557713 IFNAR1P17181 557 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 LAG3P18627 525 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
SCFD1-224ENST00000557713 USP11P51784 963 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 EVCP57679 992 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 PLCB3Q01970 1234 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 AKAP17AQ02040 695 aaKnown RBP18.03■□□□□ 0.48
SCFD1-224ENST00000557713 KCNC3Q14003 757 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 ZNF710Q8N1W2 664 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 LRRC71Q8N4P6 559 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 CCDC148Q8NFR7 591 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 SLC5A5Q92911 643 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 MAP7D2Q96T17 732 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 RIT2Q99578 217 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 CDCA3Q99618 268 aaPredicted RBP18.03■□□□□ 0.48
SCFD1-224ENST00000557713 AKT3Q9Y243 479 aa18.03■□□□□ 0.48
SCFD1-224ENST00000557713 OATP04181 439 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 TMOD1P28289 359 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
SCFD1-224ENST00000557713 TMEM184AQ6ZMB5 413 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 ALYREFQ86V81 257 aaKnown RBP18.02■□□□□ 0.48
SCFD1-224ENST00000557713 SUSD6Q92537 303 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms