RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 FAM26DQ5JW98 314 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 KIAA0319LQ8IZA0 1049 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 AKT3Q9Y243 479 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CLIC4Q9Y696 253 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 FNDC1Q4ZHG4 1894 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 ZBTB39O15060 712 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 RFC5P40937 340 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 EMC2Q15006 297 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 KRT79Q5XKE5 535 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 CNKSR3Q6P9H4 555 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 NME8Q8N427 588 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 LINC01465Q8N7H1 131 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 HERVK_113Q902F9 699 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 SCLT1Q96NL6 688 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 USP28Q96RU2 1077 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 JPH2Q9BR39 696 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 OSBPL7Q9BZF2 842 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 CXXC1Q9P0U4 656 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 PPME1Q9Y570 386 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 STK24Q9Y6E0 443 aa11.82□□□□□ -0.52
HNRNPC-232ENST00000557442 SZT2Q5T011 3432 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 A0A087WWV3 80 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 BAIAP3O94812 1187 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 CDC25AP30304 524 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 RARRES1P49788 294 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 DNM2P50570 870 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 DRP2Q13474 957 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 LPIN1Q14693 890 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 PTPAQ15257 358 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 KIZQ2M2Z5 673 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 FBXO47Q5MNV8 452 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 SEPT8Q92599 483 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 NACC1Q96RE7 527 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 MTRQ99707 1265 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 ANKEF1Q9NU02 776 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
HNRNPC-232ENST00000557442 CHD9Q3L8U1 2897 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 USO1O60763 962 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 MUTP22033 750 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 MARCKSP29966 332 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 KCNJ6P48051 423 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 IKBKEQ14164 716 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 ECM1Q16610 540 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 RASIP1Q5U651 963 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 CDK5RAP3Q96JB5 506 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 ZNF668Q96K58 619 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 AK8Q96MA6 479 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 ZNF396Q96N95 335 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 OSMRQ99650 979 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 DHX33Q9H6R0 707 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 DBR1Q9UK59 544 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
HNRNPC-232ENST00000557442 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 TDRD15B5MCY1 1934 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 ARHGEF35A5YM69 484 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 GAS2O43903 313 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 GPR32O75388 356 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 DGAT1O75907 488 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 XRCC6P12956 609 aaKnown RBP eCLIP11.79□□□□□ -0.523e-6■□□□□ 10.7
HNRNPC-232ENST00000557442 CD52P31358 61 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 LONP1P36776 959 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 GPC3P51654 580 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 CRYBB1P53674 252 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 WDR5P61964 334 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 GRIN1Q05586 938 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 PAK2Q13177 524 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 STK38Q15208 465 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 CABP7Q86V35 215 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms