RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 PPP4R3AQ6IN85 833 aa23.69■■□□□ 1.38
FOXA1-205ENST00000557418 PRDM6Q9NQX0 595 aa23.69■■□□□ 1.38
FOXA1-205ENST00000557418 GINS2Q9Y248 185 aa23.69■■□□□ 1.38
FOXA1-205ENST00000557418 KDM3AQ9Y4C1 1321 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 MAGEB2O15479 319 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 MIER3Q7Z3K6 550 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 METTL13Q8N6R0 699 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 RDM1Q8NG50 284 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 SP7Q8TDD2 431 aaPredicted RBP23.68■■□□□ 1.38
FOXA1-205ENST00000557418 FTHL17Q9BXU8 183 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 SUGCTQ9HAC7 445 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 PADI3Q9ULW8 664 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 NOL7Q9UMY1 257 aaKnown RBP23.68■■□□□ 1.38
FOXA1-205ENST00000557418 EYSQ5T1H1 3165 aa23.68■■□□□ 1.38
FOXA1-205ENST00000557418 IGSF9BQ9UPX0 1349 aa23.67■■□□□ 1.38
FOXA1-205ENST00000557418 PRUNE2Q8WUY3 3088 aa23.67■■□□□ 1.38
FOXA1-205ENST00000557418 PAK2Q13177 524 aa23.67■■□□□ 1.38
FOXA1-205ENST00000557418 TTC38Q5R3I4 469 aa23.67■■□□□ 1.38
FOXA1-205ENST00000557418 PCDHB6Q9Y5E3 794 aa23.67■■□□□ 1.38
FOXA1-205ENST00000557418 TTC3P53804 2025 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 SLC37A4O43826 429 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 ZNF862O60290 1169 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 C22orf31O95567 290 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 OATP04181 439 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 GCFC2P16383 781 aaKnown RBP23.66■■□□□ 1.38
FOXA1-205ENST00000557418 ATP2B1P20020 1258 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 ETNPPLQ8TBG4 499 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 NAP1L4Q99733 375 aaKnown RBP23.66■■□□□ 1.38
FOXA1-205ENST00000557418 COL25A1Q9BXS0 654 aaPredicted RBP23.66■■□□□ 1.38
FOXA1-205ENST00000557418 CDHR5Q9HBB8 845 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.66■■□□□ 1.38
FOXA1-205ENST00000557418 LMCD1Q9NZU5 365 aa23.66■■□□□ 1.38
FOXA1-205ENST00000557418 UNC80Q8N2C7 3258 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 MARCH6O60337 910 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 CCNT1O60563 726 aaKnown RBP23.65■■□□□ 1.38
FOXA1-205ENST00000557418 LPXNO60711 386 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 TMOD1P28289 359 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 NFX1Q12986 1120 aaKnown RBP23.65■■□□□ 1.38
FOXA1-205ENST00000557418 SKIV2LQ15477 1246 aaKnown RBP23.65■■□□□ 1.38
FOXA1-205ENST00000557418 ZNF174Q15697 407 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 ODR4Q5SWX8 454 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 EFCAB12Q6NXP0 572 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 RTN4RL1Q86UN2 441 aaPredicted RBP23.65■■□□□ 1.38
FOXA1-205ENST00000557418 FBXO22Q8NEZ5 403 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 GDPD5Q8WTR4 605 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 FAM20AQ96MK3 541 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 SAMD11Q96NU1 681 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 C17orf80Q9BSJ5 609 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 THEGQ9P2T0 379 aa23.65■■□□□ 1.38
FOXA1-205ENST00000557418 RPS6KA5O75582 802 aa23.64■■□□□ 1.37
FOXA1-205ENST00000557418 PRKCEQ02156 737 aa23.64■■□□□ 1.37
FOXA1-205ENST00000557418 ORC2Q13416 577 aaPredicted RBP23.64■■□□□ 1.37
FOXA1-205ENST00000557418 B3GNT9Q6UX72 402 aa23.64■■□□□ 1.37
FOXA1-205ENST00000557418 FAM43BQ6ZT52 329 aaPredicted RBP23.64■■□□□ 1.37
FOXA1-205ENST00000557418 FIBCD1Q8N539 461 aa23.64■■□□□ 1.37
FOXA1-205ENST00000557418 ATXN2LQ8WWM7 1075 aaKnown RBP23.64■■□□□ 1.37
FOXA1-205ENST00000557418 SYMPKQ92797 1274 aaKnown RBP23.64■■□□□ 1.37
FOXA1-205ENST00000557418 MCM7P33993 719 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 CRYBB1P53674 252 aaPredicted RBP23.63■■□□□ 1.37
FOXA1-205ENST00000557418 UGCGQ16739 394 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 TMEM266Q2M3C6 531 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 C4orf32Q8N8J7 132 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 CHAMP1Q96JM3 812 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 USP28Q96RU2 1077 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 NOC2LQ9Y3T9 749 aaKnown RBP23.63■■□□□ 1.37
FOXA1-205ENST00000557418 CLIC4Q9Y696 253 aa23.63■■□□□ 1.37
FOXA1-205ENST00000557418 GPR182O15218 404 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 VTNP04004 478 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 CLCN3P51790 818 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 DNM1Q05193 864 aaKnown RBP23.62■■□□□ 1.37
FOXA1-205ENST00000557418 KIZQ2M2Z5 673 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 FOXD4L6Q3SYB3 417 aaPredicted RBP23.62■■□□□ 1.37
FOXA1-205ENST00000557418 EPC2Q52LR7 807 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 XKR3Q5GH77 459 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 TJAP1Q5JTD0 557 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 FOXD4L3Q6VB84 417 aaPredicted RBP23.62■■□□□ 1.37
FOXA1-205ENST00000557418 POTEDQ86YR6 584 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 MAP7D2Q96T17 732 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 PPP1R16BQ96T49 567 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 TMEM60Q9H2L4 133 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 KCNMB3Q9NPA1 279 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 AKT3Q9Y243 479 aa23.62■■□□□ 1.37
FOXA1-205ENST00000557418 STAG3L1P0CL83 205 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 MRPS5P82675 430 aaKnown RBP23.61■■□□□ 1.37
FOXA1-205ENST00000557418 TBC1D8BQ0IIM8 1120 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 PTPAQ15257 358 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 TMEM192Q8IY95 271 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 ZNF710Q8N1W2 664 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 LINC01599Q8WXQ3 324 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 HAS1Q92839 578 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 ZNF396Q96N95 335 aaPredicted RBP23.61■■□□□ 1.37
FOXA1-205ENST00000557418 MTMR9Q96QG7 549 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 OSMRQ99650 979 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 NIFKQ9BYG3 293 aaKnown RBP23.61■■□□□ 1.37
FOXA1-205ENST00000557418 TMX1Q9H3N1 280 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 ERVK-5Q9HDB9 667 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 ST3GAL5Q9UNP4 418 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 ATP6V1DQ9Y5K8 247 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 TRANK1O15050 2925 aa23.61■■□□□ 1.37
FOXA1-205ENST00000557418 DDX11L8A8MPP1 907 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms