RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 ZCCHC8Q6NZY4 707 aaKnown RBP6.39□□□□□ -1.39
VRK1-207ENST00000557352 MAMDC4Q6UXC1 1216 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 RNF207Q6ZRF8 634 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 DDX53Q86TM3 631 aaKnown RBP6.39□□□□□ -1.39
VRK1-207ENST00000557352 ZFPM1Q8IX07 1006 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 OR14K1Q8NGZ2 314 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 SAMD15Q9P1V8 674 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 FAM184BQ9ULE4 1060 aa6.39□□□□□ -1.39
VRK1-207ENST00000557352 B4E1Z4 1266 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 CYR61O00622 381 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 DVL2O14641 736 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 PLSCR1O15162 318 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 GLRX3O76003 335 aaKnown RBP6.38□□□□□ -1.39
VRK1-207ENST00000557352 IGFALSP35858 605 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 FOXL1Q12952 345 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 FOXE3Q13461 319 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 SQSTM1Q13501 440 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 BMS1Q14692 1282 aaKnown RBP6.38□□□□□ -1.39
VRK1-207ENST00000557352 NFE2L2Q16236 605 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 USP39Q53GS9 565 aaKnown RBP6.38□□□□□ -1.39
VRK1-207ENST00000557352 GPR135Q8IZ08 494 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 SREK1Q8WXA9 508 aaKnown RBP6.38□□□□□ -1.39
VRK1-207ENST00000557352 EXTL1Q92935 676 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 FOXB1Q99853 325 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 PLA2G3Q9NZ20 509 aa6.38□□□□□ -1.39
VRK1-207ENST00000557352 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
VRK1-207ENST00000557352 FNTBP49356 437 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 KIF11P52732 1056 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 HMGA2P52926 109 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 MAP3K12Q12852 859 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 USP51Q70EK9 711 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 CHST14Q8NCH0 376 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 ZNF503Q96F45 646 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 FAM89AQ96GI7 184 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 MRIQ9BWK5 157 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 NELFAQ9H3P2 528 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 TNPO3Q9Y5L0 923 aaKnown RBP6.37□□□□□ -1.39
VRK1-207ENST00000557352 HS3ST3A1Q9Y663 406 aa6.37□□□□□ -1.39
VRK1-207ENST00000557352 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 TRAF5O00463 557 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 SLC26A4O43511 780 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 ASLP04424 464 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 MSX2P35548 267 aaPredicted RBP6.36□□□□□ -1.39
VRK1-207ENST00000557352 ADAM15Q13444 863 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 ZNF808Q8N4W9 903 aaPredicted RBP6.36□□□□□ -1.39
VRK1-207ENST00000557352 ZNF341Q9BYN7 854 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 AGO3Q9H9G7 860 aaKnown RBP6.36□□□□□ -1.39
VRK1-207ENST00000557352 KANSL2Q9H9L4 492 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 VWA7Q9Y334 891 aa6.36□□□□□ -1.39
VRK1-207ENST00000557352 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
VRK1-207ENST00000557352 OPA1O60313 960 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 PRLP01236 227 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 RGS3P49796 1198 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 SLC6A3Q01959 620 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 ZNF460Q14592 562 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 GRM7Q14831 915 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 SHCBP1Q8NEM2 672 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 ACSS2Q9NR19 701 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 MAGEL2Q9UJ55 1249 aa6.35□□□□□ -1.39
VRK1-207ENST00000557352 PTPDC1A2A3K4 754 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 NPIPB8E9PQR5 432 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
VRK1-207ENST00000557352 ROM1Q03395 351 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 KLHDC10Q6PID8 442 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 MAML3Q96JK9 1138 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 CABP5Q9NP86 173 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 TLR9Q9NR96 1032 aa6.34□□□□□ -1.39
VRK1-207ENST00000557352 SAE1Q9UBE0 346 aaPredicted RBP6.34□□□□□ -1.39
VRK1-207ENST00000557352 SDSP20132 328 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 ACRV1P26436 265 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 HIBADHP31937 336 aaKnown RBP6.33□□□□□ -1.4
VRK1-207ENST00000557352 STAT3P40763 770 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 ANTXR2P58335 489 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 KLF10Q13118 480 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 RIN1Q13671 783 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 PIK3R6Q5UE93 754 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 ADGRE4PQ86SQ3 457 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 C1orf210Q8IVY1 113 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 IL17DQ8TAD2 202 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 RABGGTAQ92696 567 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 LPPQ93052 612 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 PCIF1Q9H4Z3 704 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 ZSWIM4Q9H7M6 989 aa6.33□□□□□ -1.4
VRK1-207ENST00000557352 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
VRK1-207ENST00000557352 H7C1D1 291 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 H2AFYO75367 372 aaKnown RBP6.32□□□□□ -1.4
VRK1-207ENST00000557352 CYP17A1P05093 508 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
VRK1-207ENST00000557352 ADCY7P51828 1080 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
VRK1-207ENST00000557352 DGCR2P98153 550 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms