RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 SIX2Q9NPC8 291 aa21.1■□□□□ 0.97
FOXN3-214ENST00000557258 SP4Q02446 784 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 ZKSCAN4Q969J2 545 aaPredicted RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 EDEM3Q9BZQ6 932 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 RBM12Q9NTZ6 932 aaKnown RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 HYOU1Q9Y4L1 999 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 K7ENM7 598 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 ATP8B1O43520 1251 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 ATP9AO75110 1047 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 RPS6P62753 249 aaKnown RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 UGCGQ16739 394 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 BMT2Q1RMZ1 405 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 NBPF12Q5TAG4 269 aaPredicted RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 IQCEQ6IPM2 695 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 PADI6Q6TGC4 694 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 PRPF38AQ8NAV1 312 aaKnown RBP21.09■□□□□ 0.97
FOXN3-214ENST00000557258 TEPSINQ96N21 525 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 AIPL1Q9NZN9 384 aa21.09■□□□□ 0.97
FOXN3-214ENST00000557258 FRMPD4Q14CM0 1322 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 PJA2O43164 708 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 TBC1D12O60347 775 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 NOP2P46087 812 aaKnown RBP21.08■□□□□ 0.97
FOXN3-214ENST00000557258 GBP6Q6ZN66 633 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 PROCA1Q8NCQ7 364 aaPredicted RBP21.08■□□□□ 0.97
FOXN3-214ENST00000557258 ELMO3Q96BJ8 720 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 TAOK3Q9H2K8 898 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 EHMT1Q9H9B1 1298 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 AGPAT3Q9NRZ7 376 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 PIM2Q9P1W9 311 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 ZHX2Q9Y6X8 837 aa21.08■□□□□ 0.97
FOXN3-214ENST00000557258 ZSCAN5CA6NGD5 496 aaPredicted RBP21.08■□□□□ 0.96
FOXN3-214ENST00000557258 RBAK-RBAKDNI3L0D1 243 aa21.08■□□□□ 0.96
FOXN3-214ENST00000557258 PLA2G4FQ68DD2 849 aa21.08■□□□□ 0.96
FOXN3-214ENST00000557258 WDR93Q6P2C0 686 aa21.08■□□□□ 0.96
FOXN3-214ENST00000557258 FAN1Q9Y2M0 1017 aa21.08■□□□□ 0.96
FOXN3-214ENST00000557258 RIPK3Q9Y572 518 aa21.08■□□□□ 0.96
FOXN3-214ENST00000557258 TESPA1A2RU30 521 aaPredicted RBP21.07■□□□□ 0.96
FOXN3-214ENST00000557258 SLC26A4O43511 780 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 GAP43P17677 238 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 VCAM1P19320 739 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 DLG4P78352 724 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 MTMR1Q13613 665 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 TKFCQ3LXA3 575 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 SYN2Q92777 582 aaPredicted RBP21.07■□□□□ 0.96
FOXN3-214ENST00000557258 KIFC3Q9BVG8 833 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 SYNPO2Q9UMS6 1093 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 TELO2Q9Y4R8 837 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 ESYT3A0FGR9 886 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 EXOC3O60645 756 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 PSMC2P35998 433 aaKnown RBP21.07■□□□□ 0.96
FOXN3-214ENST00000557258 HSD17B4P51659 736 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 MAPK7Q13164 816 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 SF3B2Q13435 895 aaKnown RBP21.07■□□□□ 0.96
FOXN3-214ENST00000557258 PRKG1Q13976 671 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 NAB2Q15742 525 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 ARHGAP44Q17R89 818 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 MICALL2Q8IY33 904 aa21.07■□□□□ 0.96
FOXN3-214ENST00000557258 NUCKS1Q9H1E3 243 aaKnown RBP21.07■□□□□ 0.96
FOXN3-214ENST00000557258 DHX15O43143 795 aaKnown RBP21.06■□□□□ 0.96
FOXN3-214ENST00000557258 NPEPPSP55786 919 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 SOX10P56693 466 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 SYTL5Q8TDW5 730 aaPredicted RBP21.06■□□□□ 0.96
FOXN3-214ENST00000557258 ZBED3Q96IU2 234 aaPredicted RBP21.06■□□□□ 0.96
FOXN3-214ENST00000557258 GBP3Q9H0R5 595 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
FOXN3-214ENST00000557258 GRID2IPA4D2P6 1211 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 SETQ01105 290 aaPredicted RBP21.06■□□□□ 0.96
FOXN3-214ENST00000557258 TRAF1Q13077 416 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 HS2ST1Q7LGA3 356 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 BORCS6Q96GS4 357 aa21.06■□□□□ 0.96
FOXN3-214ENST00000557258 NFKBIEO00221 500 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 HOXA7P31268 230 aaPredicted RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 ALKBH5Q6P6C2 394 aaKnown RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 ATG4CQ96DT6 458 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 CBWD1Q9BRT8 395 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 SEPT11Q9NVA2 429 aaKnown RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 HACL1Q9UJ83 578 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 CTDP1Q9Y5B0 961 aaPredicted RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 STK24Q9Y6E0 443 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 DALRD3Q5D0E6 543 aaKnown RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 FKBP1CQ5VVH2 108 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 U2AF1L4Q8WU68 220 aaKnown RBP21.05■□□□□ 0.96
FOXN3-214ENST00000557258 DEFB129Q9H1M3 183 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 NAGPAQ9UK23 515 aa21.05■□□□□ 0.96
FOXN3-214ENST00000557258 PEX10O60683 326 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 FMO5P49326 533 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 GMPSP49915 693 aaPredicted RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 B3GNT9Q6UX72 402 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 GLYCTKQ8IVS8 523 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 CCDC43Q96MW1 224 aaKnown RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 RMDN3Q96TC7 470 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 METTL14Q9HCE5 456 aaKnown RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 AGO4Q9HCK5 861 aaKnown RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 FRMD4BQ9Y2L6 1034 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 GOLGA8IPA6NC78 632 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 GOLGA8JA6NMD2 632 aa21.04■□□□□ 0.96
FOXN3-214ENST00000557258 SLC16A3O15427 465 aaKnown RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 TCP1P17987 556 aaKnown RBP21.04■□□□□ 0.96
FOXN3-214ENST00000557258 DLK2Q6UY11 383 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms