RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
APEX1-216ENST00000557159 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
APEX1-216ENST00000557159 FAM187AA6NFU0 413 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 SLC26A4O43511 780 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 CEP104O60308 925 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 AGTP01019 485 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 GNA11P29992 359 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 DHX9Q08211 1270 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 TNFAIP8L3Q5GJ75 292 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 NEK8Q86SG6 692 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 METTL13Q8N6R0 699 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 TPCN2Q8NHX9 752 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 GPKOWQ92917 476 aaPredicted RBP eCLIP13.64□□□□□ -0.239e-8■■■□□ 15.2
APEX1-216ENST00000557159 FAM163AQ96GL9 167 aaPredicted RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 FMO2Q99518 471 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 PABPC3Q9H361 631 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 BAIAP2L1Q9UHR4 511 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 MAD2L2Q9UI95 211 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 ANKRD33BA6NCL7 494 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 KRIT1O00522 736 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 DAPK3O43293 454 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 WFS1O76024 890 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 LUC7L3O95232 432 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 ANP32DO95626 131 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 MMEP08473 750 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 BZW1Q7L1Q6 419 aaKnown RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 RAD54LQ92698 747 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 HES6Q96HZ4 224 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 RAB34Q9BZG1 259 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 VPS33BQ9H267 617 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 NLRC4Q9NPP4 1024 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.64□□□□□ -0.23
APEX1-216ENST00000557159 BCCIPQ9P287 314 aaKnown RBP eCLIP13.64□□□□□ -0.23
APEX1-216ENST00000557159 ADAMTS1Q9UHI8 967 aa13.64□□□□□ -0.23
APEX1-216ENST00000557159 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
APEX1-216ENST00000557159 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 DCDC2CA8MYV0 355 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 NQO1P15559 274 aaKnown RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 FLT3P36888 993 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 PTENP60484 403 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 ADCY2Q08462 1091 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 ACCSLQ4AC99 568 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 TMEM119Q4V9L6 283 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 IRF2BP2Q7Z5L9 587 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 DDX42Q86XP3 938 aaKnown RBP eCLIP13.63□□□□□ -0.23
APEX1-216ENST00000557159 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 ZNF483Q8TF39 744 aaPredicted RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 STAMBPL1Q96FJ0 436 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 NAP1L3Q99457 506 aaPredicted RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 EYA3Q99504 573 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
APEX1-216ENST00000557159 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
APEX1-216ENST00000557159 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 O00370 1275 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 ABLIM1O14639 778 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 NMT2O60551 498 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
APEX1-216ENST00000557159 FLOT1O75955 427 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 CHN1P15882 459 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 SKIV2L2P42285 1042 aaKnown RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 PDE6CP51160 858 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 CMPK2Q5EBM0 449 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 DUPD1Q68J44 220 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 NEK9Q8TD19 979 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 SH3GL3Q99963 347 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 PACSIN1Q9BY11 444 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 EPB41L4BQ9H329 900 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms