RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 B3GNT9Q6UX72 402 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.79■□□□□ 0.12
SLIRP-207ENST00000556831 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 MYOCDQ8IZQ8 938 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 ERMNQ8TAM6 284 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 LXNQ9BS40 222 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 CELF4Q9BZC1 486 aaKnown RBP15.79■□□□□ 0.12
SLIRP-207ENST00000556831 RAB34Q9BZG1 259 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 ZSWIM4Q9H7M6 989 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 SUGCTQ9HAC7 445 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 PCDHA11Q9Y5I1 949 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 MUC6Q6W4X9 2439 aa15.79■□□□□ 0.12
SLIRP-207ENST00000556831 REV3LO60673 3130 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 EML1O00423 815 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
SLIRP-207ENST00000556831 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.12
SLIRP-207ENST00000556831 CYP4A11Q02928 519 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 MGAT3Q09327 533 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
SLIRP-207ENST00000556831 FBXO47Q5MNV8 452 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 SLC7A3Q8WY07 619 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
SLIRP-207ENST00000556831 LCHNA4D1U4 455 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 TMEM150BA6NC51 233 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-207ENST00000556831 CLCN3P51790 818 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 POLGP54098 1239 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-207ENST00000556831 LPIN1Q14693 890 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 RILPL1Q5EBL4 403 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 TPH2Q8IWU9 490 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 DYDC2Q96IM9 177 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 CEP170P1Q96L14 293 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 FTHL17Q9BXU8 183 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 NIFKQ9BYG3 293 aaKnown RBP15.77■□□□□ 0.12
SLIRP-207ENST00000556831 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 PPME1Q9Y570 386 aa15.77■□□□□ 0.12
SLIRP-207ENST00000556831 EVPLQ92817 2033 aa15.77■□□□□ 0.11
SLIRP-207ENST00000556831 KDM3AQ9Y4C1 1321 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 VPS37CA5D8V6 355 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-207ENST00000556831 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 VTNP04004 478 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 CD52P31358 61 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 YWHABP31946 246 aaKnown RBP15.76■□□□□ 0.11
SLIRP-207ENST00000556831 CDC42EP1Q00587 391 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 KIZQ2M2Z5 673 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 HAUS3Q68CZ6 603 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 PLA2G4FQ68DD2 849 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 FAM117BQ6P1L5 589 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 C4orf19Q8IY42 314 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 KIAA0319LQ8IZA0 1049 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 NLRP7Q8WX94 980 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 EIF2AK1Q9BQI3 630 aaKnown RBP15.76■□□□□ 0.11
SLIRP-207ENST00000556831 SH2D3AQ9BRG2 576 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
SLIRP-207ENST00000556831 POTEMA6NI47 508 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 LAD1O00515 517 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 GPR182O15218 404 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CA3P07451 260 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 RFC5P40937 340 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 TECP42680 631 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 SPIRE1Q08AE8 756 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CUL4AQ13619 759 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CTTNQ14247 550 aaKnown RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 FAM43BQ6ZT52 329 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 YME1L1Q96TA2 773 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 GAS2L1Q99501 681 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 OSMRQ99650 979 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 AGO3Q9H9G7 860 aaKnown RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CERS4Q9HA82 394 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 CDHR5Q9HBB8 845 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-207ENST00000556831 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 STK24Q9Y6E0 443 aa15.75■□□□□ 0.11
SLIRP-207ENST00000556831 TRANK1O15050 2925 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.74■□□□□ 0.11
SLIRP-207ENST00000556831 DENND3A2RUS2 1198 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 EPOPA6NHQ4 379 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 RFXAPO00287 272 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 GAS2O43903 313 aaKnown RBP15.74■□□□□ 0.11
SLIRP-207ENST00000556831 UPP2O95045 317 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 STBD1O95210 358 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 GJB5O95377 273 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 FOSL2P15408 326 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 NLRP11P59045 1033 aaKnown RBP15.74■□□□□ 0.11
SLIRP-207ENST00000556831 NBR1Q14596 966 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 ANO5Q75V66 913 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 INTS4Q96HW7 963 aaKnown RBP15.74■□□□□ 0.11
SLIRP-207ENST00000556831 RAD9AQ99638 391 aa15.74■□□□□ 0.11
SLIRP-207ENST00000556831 PRDM12Q9H4Q4 367 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms