RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PPP1R37O75864 691 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 TRIM49P0CI25 452 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 TRIM49CP0CI26 452 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 MUTP22033 750 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 RPL13P26373 211 aaKnown RBP11.1□□□□□ -0.63
TMEM260-211ENST00000556648 HIRAP54198 1017 aaPredicted RBP11.1□□□□□ -0.63
TMEM260-211ENST00000556648 PRKG1Q13976 671 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 NEK9Q8TD19 979 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 SYN2Q92777 582 aaPredicted RBP11.1□□□□□ -0.63
TMEM260-211ENST00000556648 GPRC5CQ9NQ84 441 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 GINM1Q9NU53 330 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 ODF2LQ9ULJ1 636 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
TMEM260-211ENST00000556648 A0A087X0T9 212 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PJA2O43164 708 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 FAM228BP0C875 321 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 UCHL3P15374 230 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 RARRES1P49788 294 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 USP14P54578 494 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 KLHL30Q0D2K2 578 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 EXOC3L4Q17RC7 722 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 UTP14CQ5TAP6 766 aaKnown RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 MSANTD4Q8NCY6 345 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 STRA6Q9BX79 667 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PLCB1Q9NQ66 1216 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 AIPL1Q9NZN9 384 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 UBE4BO95155 1302 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 LCTP09848 1927 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 SORBS3O60504 671 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PEX10O60683 326 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 VSNL1P62760 191 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 C2orf54Q08AI8 447 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 CBWD6Q4V339 395 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 CBWD3Q5JTY5 395 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 CBWD5Q5RIA9 395 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ZNF571Q7Z3V5 609 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 KRT222Q8N1A0 295 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ZSWIM2Q8NEG5 633 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ZBTB9Q96C00 473 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 PSMB7Q99436 277 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
TMEM260-211ENST00000556648 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 EHD2Q9NZN4 543 aa11.09□□□□□ -0.63
TMEM260-211ENST00000556648 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 TACC1O75410 805 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 DSG3P32926 999 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 NPEPPSP55786 919 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 PTK2Q05397 1052 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 NFIL3Q16649 462 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 GBP6Q6ZN66 633 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 RDH13Q8NBN7 331 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 PCIF1Q9H4Z3 704 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 AS3MTQ9HBK9 375 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 GPRC5DQ9NZD1 345 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 KCND2Q9NZV8 630 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 DBR1Q9UK59 544 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 RAB21Q9UL25 225 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 ZNF214Q9UL59 606 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 MYH10P35580 1976 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 KIAA1217Q5T5P2 1943 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 FAM170AA1A519 330 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 KLRC1P26715 233 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 YWHABP31946 246 aaKnown RBP11.08□□□□□ -0.64
TMEM260-211ENST00000556648 JAM2P57087 298 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 C12orf42Q96LP6 360 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 SPAG5Q96R06 1193 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 SNX12Q9UMY4 172 aa11.08□□□□□ -0.64
TMEM260-211ENST00000556648 RGS20O76081 388 aa11.07□□□□□ -0.64
TMEM260-211ENST00000556648 LYPLA2O95372 231 aa11.07□□□□□ -0.64
TMEM260-211ENST00000556648 CXCR5P32302 372 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms