RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SPTY2D1Q68D10 685 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-219ENST00000556413 D2HGDHQ8N465 521 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-219ENST00000556413 MMRN2Q9H8L6 949 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 AURKAIP1Q9NWT8 199 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-219ENST00000556413 CEP72Q9P209 647 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 GIT1Q9Y2X7 761 aa5.78□□□□□ -1.48
SCFD1-219ENST00000556413 SLC12A8A0AV02 714 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 MAFO75444 373 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 ZC3H6P61129 1189 aaKnown RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 PURAQ00577 322 aaKnown RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 ADAM15Q13444 863 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 RASA3Q14644 834 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 SMN1Q16637 294 aaKnown RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 ZC3H12BQ5HYM0 836 aaKnown RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 CATSPEREQ5SY80 951 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 CALML6Q8TD86 181 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 SCLYQ96I15 445 aa5.77□□□□□ -1.49
SCFD1-219ENST00000556413 MAGEB10Q96LZ2 347 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-219ENST00000556413 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 FAM221BA6H8Z2 402 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 CAPN14A8MX76 684 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 KCNA6P17658 529 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 ATP2B1P20020 1258 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 RIN1Q13671 783 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 SAFB2Q14151 953 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCFD1-219ENST00000556413 TMEM132BQ14DG7 1078 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 ABHD17CQ6PCB6 329 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 TMPRSS6Q8IU80 811 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 THEMISQ8N1K5 641 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-219ENST00000556413 FOXRED1Q96CU9 486 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-219ENST00000556413 TANGO6Q9C0B7 1094 aa5.76□□□□□ -1.49
SCFD1-219ENST00000556413 CTDP1Q9Y5B0 961 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-219ENST00000556413 APPP05067 770 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 STAT3P40763 770 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 INHBCP55103 352 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 INHBEP58166 350 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 MAP3K12Q12852 859 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 SERINC3Q13530 473 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 LRP10Q7Z4F1 713 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 RTN4RL1Q86UN2 441 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-219ENST00000556413 LDLRAD3Q86YD5 345 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 ZNF483Q8TF39 744 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-219ENST00000556413 LARP4BQ92615 738 aaKnown RBP5.75□□□□□ -1.49
SCFD1-219ENST00000556413 RABGGTAQ92696 567 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-219ENST00000556413 DEPDC7Q96QD5 511 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 MPHOSPH9Q99550 1183 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 VWA7Q9Y334 891 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 SH3BP1Q9Y3L3 701 aa5.75□□□□□ -1.49
SCFD1-219ENST00000556413 A0A087X1B8 175 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 TCRBV16S1A1N1A0A5B0 115 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 CYP27B1O15528 508 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 HIP1RO75146 1068 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ADH4P08319 380 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ZBTB48P10074 688 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ADCY7P51828 1080 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ATP2C1P98194 919 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-219ENST00000556413 IRF9Q00978 393 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
SCFD1-219ENST00000556413 RRP1BQ14684 758 aaKnown RBP5.74□□□□□ -1.49
SCFD1-219ENST00000556413 ACAP1Q15027 740 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 FGD2Q7Z6J4 655 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 IGSF22Q8N9C0 903 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 SNTG2Q9NY99 539 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 SFMBT1Q9UHJ3 866 aa5.74□□□□□ -1.49
SCFD1-219ENST00000556413 NPTXRO95502 500 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 MAKP20794 623 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 TMEM177Q53S58 311 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 C2orf69Q8N8R5 385 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 LPPQ93052 612 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 FOXB1Q99853 325 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 SLC2A4RGQ9NR83 387 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 PARPBPQ9NWS1 579 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 MAGEL2Q9UJ55 1249 aa5.73□□□□□ -1.49
SCFD1-219ENST00000556413 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 KCNQ2O43526 872 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 GTF2F1P35269 517 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCFD1-219ENST00000556413 CRHR2Q13324 411 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 CC2D1AQ6P1N0 951 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-219ENST00000556413 ZNF627Q7L945 461 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 OTOP1Q7RTM1 612 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 CLIP3Q96DZ5 547 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 DNAJC7Q99615 494 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 HIRIP3Q9BW71 556 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-219ENST00000556413 SLC6A15Q9H2J7 730 aa5.72□□□□□ -1.49
SCFD1-219ENST00000556413 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-219ENST00000556413 C2orf78A6NCI8 922 aa5.71□□□□□ -1.5
SCFD1-219ENST00000556413 H2AFYO75367 372 aaKnown RBP5.71□□□□□ -1.5
SCFD1-219ENST00000556413 SCNN1GP51170 649 aa5.71□□□□□ -1.5
SCFD1-219ENST00000556413 SESN2P58004 480 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-219ENST00000556413 ANTXR2P58335 489 aa5.71□□□□□ -1.5
SCFD1-219ENST00000556413 ADAM8P78325 824 aa5.71□□□□□ -1.5
SCFD1-219ENST00000556413 RBL2Q08999 1139 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms