RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 SEPT9Q9UHD8 586 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-218ENST00000556262 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.55■□□□□ 0.88
SDR39U1-218ENST00000556262 PLXNB2O15031 1838 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 A0A1W2PQC6 194 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 CLIC2O15247 247 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 TGFB1I1O43294 461 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 MFAP3LO75121 409 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 TGFB3P10600 412 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 ATP4AP20648 1035 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 ADORA2AP29274 412 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 SOX10P56693 466 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 MAN2A1Q16706 1144 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 FAM102BQ5T8I3 360 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 NDST4Q9H3R1 872 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 IGSF9BQ9UPX0 1349 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 GSTTP1A0A1W2PQM5 241 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 CETN3O15182 167 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 CALUO43852 315 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 NEDD9Q14511 834 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 TMEM63BQ5T3F8 832 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 PARK7Q99497 189 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 BAG1Q99933 345 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 ZNF302Q9NR11 478 aa20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 DDX41Q9UJV9 622 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-218ENST00000556262 PLXNA1Q9UIW2 1896 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 ARID2Q68CP9 1835 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 K7ENM7 598 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 DKC1O60832 514 aaKnown RBP eCLIP20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 PLS3P13797 630 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 RASAL3Q86YV0 1011 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 TRMT1Q9NXH9 659 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 MAFBQ9Y5Q3 323 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-218ENST00000556262 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 RASSF10A6NK89 507 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 NR3C1P04150 777 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 E4F1Q66K89 784 aaPredicted RBP20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 MORC4Q8TE76 937 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 ANKRD7Q92527 254 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 PCYT2Q99447 389 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 MLXIPQ9HAP2 919 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 PDGFCQ9NRA1 345 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 PCDHB13Q9Y5F0 798 aa20.52■□□□□ 0.88
SDR39U1-218ENST00000556262 TTC26A0AVF1 554 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 PPP1R37O75864 691 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 ECM2O94769 699 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 PEX3P56589 373 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 ZNF792Q3KQV3 632 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 FKBP15Q5T1M5 1219 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 METTL7BQ6UX53 244 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 ZNF710Q8N1W2 664 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 CCDC155Q8N6L0 562 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 DRC1Q96MC2 740 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 PANX2Q96RD6 677 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 CYP26B1Q9NR63 512 aa20.52■□□□□ 0.87
SDR39U1-218ENST00000556262 IGKV6D-21A0A0A0MT36 114 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 IGF2BP3O00425 579 aaKnown RBP eCLIP20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 GNA14O95837 355 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 TPM1P09493 284 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 CASP4P49662 377 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 MTERF2Q49AM1 385 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 XKR3Q5GH77 459 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 STXBP4Q6ZWJ1 553 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 ARMCX2Q7L311 632 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 SAPCD2Q86UD0 394 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 TRIM59Q8IWR1 403 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 COPS5Q92905 334 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 PCMTD1Q96MG8 357 aaPredicted RBP20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 ERGIC2Q96RQ1 377 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 TIPINQ9BVW5 301 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 IVNS1ABPQ9Y6Y0 642 aa20.51■□□□□ 0.87
SDR39U1-218ENST00000556262 AKAP3O75969 853 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 TCF7P36402 384 aaPredicted RBP20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 MARSP56192 900 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 TRIM14Q14142 442 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 HSDL1Q3SXM5 330 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 GPR142Q7Z601 462 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 CENPFP49454 3210 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 UBE4BO95155 1302 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 ASB14A6NK59 587 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 SLC16A4O15374 487 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 STX10O60499 249 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 OATP04181 439 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 KRT9P35527 623 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 FAM110CQ1W6H9 321 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 CPA4Q9UI42 421 aa20.5■□□□□ 0.87
SDR39U1-218ENST00000556262 TRIM21P19474 475 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 KCNV1Q6PIU1 500 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 SYCP3Q8IZU3 236 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 KIF18AQ8NI77 898 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 SEPT1Q8WYJ6 367 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 BSNDQ8WZ55 320 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 TTYH3Q9C0H2 523 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 GBP3Q9H0R5 595 aa20.49■□□□□ 0.87
SDR39U1-218ENST00000556262 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms