RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 R3HDMLQ9H3Y0 253 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 LARSQ9P2J5 1176 aaKnown RBP16.21■□□□□ 0.19
VPS33B-205ENST00000556096 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 NR2F2P24468 414 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 ALCAMQ13740 583 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 ABHD15Q6UXT9 468 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 OTUD6AQ7L8S5 288 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 DNAJC7Q99615 494 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 SIK3Q9Y2K2 1263 aa16.2■□□□□ 0.18
VPS33B-205ENST00000556096 TGFB1I1O43294 461 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 PPP2R3AQ06190 1150 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 Q3C1V9 767 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 SHCBP1Q8NEM2 672 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 MROH8Q9H579 483 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 PPP2R2CQ9Y2T4 447 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 BACH1O14867 736 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 SLC16A3O15427 465 aaKnown RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 PPP1R37O75864 691 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 STBD1O95210 358 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 ATG7O95352 703 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 NR3C1P04150 777 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 PLS3P13797 630 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 TRIM21P19474 475 aaKnown RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 ACTR2P61160 394 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 ZBED6P86452 979 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 TAF1CQ15572 869 aaPredicted RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 DRC1Q96MC2 740 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 ST6GALNAC4Q9H4F1 302 aa16.19■□□□□ 0.18
VPS33B-205ENST00000556096 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.19■□□□□ 0.18
VPS33B-205ENST00000556096 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 DNAJC25-GNG10A0A024R161 153 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 LOC102724159A0A0B4J2E5 919 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 SOWAHDA6NJG2 315 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 TGFB3P10600 412 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 INHBEP58166 350 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 SP2Q02086 613 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 KCNA1Q09470 495 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 CRHR2Q13324 411 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 PWP2Q15269 919 aaKnown RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 TSR1Q2NL82 804 aaKnown RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 ZC2HC1CQ53FD0 456 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 SWSAP1Q6NVH7 229 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 RAD9BQ6WBX8 426 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 ANO5Q75V66 913 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 SLC17A8Q8NDX2 589 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 SMCR8Q8TEV9 937 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-205ENST00000556096 EDEM3Q9BZQ6 932 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 PAXBP1Q9Y5B6 917 aa16.18■□□□□ 0.18
VPS33B-205ENST00000556096 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
VPS33B-205ENST00000556096 ZNF862O60290 1169 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 KLK7P49862 253 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 ERVK-9P63128 1117 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 ERVK-24P63145 666 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 MEA1Q16626 185 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
VPS33B-205ENST00000556096 TOGARAM2Q6ZUX3 1019 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 ZNF397Q8NF99 534 aaPredicted RBP16.17■□□□□ 0.18
VPS33B-205ENST00000556096 ARMCX3Q9UH62 379 aaPredicted RBP16.17■□□□□ 0.18
VPS33B-205ENST00000556096 PLXNB2O15031 1838 aa16.17■□□□□ 0.18
VPS33B-205ENST00000556096 NPEPPSP55786 919 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 MYBPC2Q14324 1141 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 KCTD2Q14681 263 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 SEPT14Q6ZU15 432 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 HS2ST1Q7LGA3 356 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 TMEM174Q8WUU8 243 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 MMP19Q99542 508 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 AGPAT5Q9NUQ2 364 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 DMAC2Q9NW81 257 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 CPA4Q9UI42 421 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 ADGRG1Q9Y653 693 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 MYH11P35749 1972 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 TMEM150BA6NC51 233 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 AKAP3O75969 853 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 CCDC175P0C221 793 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
VPS33B-205ENST00000556096 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
VPS33B-205ENST00000556096 KCNMA1Q12791 1236 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 NEDD9Q14511 834 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms