RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KIAA0319LQ8IZA0 1049 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 ZNF710Q8N1W2 664 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 RETREG2Q8NC44 543 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 SLC7A3Q8WY07 619 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
SYNE2-219ENST00000555323 LARP4BQ92615 738 aaKnown RBP14.12□□□□□ -0.15
SYNE2-219ENST00000555323 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 USP25Q9UHP3 1055 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 ATP11BQ9Y2G3 1177 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 ARHGEF35A5YM69 484 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 KIAA0355O15063 1070 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-219ENST00000555323 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
SYNE2-219ENST00000555323 CLTBP09497 229 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 CYP2C9P11712 490 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 GUCY2CP25092 1073 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 TMOD1P28289 359 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 STAT6P42226 847 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 NDUFA8P51970 172 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 POLGP54098 1239 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-219ENST00000555323 UBE2HP62256 183 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 CDC42EP1Q00587 391 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 IER5Q5VY09 327 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 PDILTQ8N807 584 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 MCPH1Q8NEM0 835 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 ENGASEQ8NFI3 743 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 CAGE1Q8TC20 777 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
SYNE2-219ENST00000555323 WNT8BQ93098 351 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 ZBTB10Q96DT7 871 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 TIPINQ9BVW5 301 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 GOLPH3LQ9H4A5 285 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 KBTBD4Q9NVX7 518 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 NOD1Q9Y239 953 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 DNAH12Q6ZR08 3092 aa14.11□□□□□ -0.15
SYNE2-219ENST00000555323 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 ZNF202O95125 648 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 ARL2P36404 184 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 SYKP43405 635 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 SNW1Q13573 536 aaKnown RBP14.1□□□□□ -0.15
SYNE2-219ENST00000555323 MCM6Q14566 821 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 EMC2Q15006 297 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 ARSHQ5FYA8 562 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 FAM26DQ5JW98 314 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 RUFY4Q6ZNE9 571 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 SV2BQ7L1I2 683 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 FMR1NBQ8N0W7 255 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-219ENST00000555323 METTL13Q8N6R0 699 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 DNAJB3Q8WWF6 145 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 TCP11Q8WWU5 503 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 DHX58Q96C10 678 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 CCDC43Q96MW1 224 aaKnown RBP14.1□□□□□ -0.15
SYNE2-219ENST00000555323 MTRQ99707 1265 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 TNMDQ9H2S6 317 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 SUGCTQ9HAC7 445 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 MAGEF1Q9HAY2 307 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 ATP6V0A4Q9HBG4 840 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 LMBRD1Q9NUN5 540 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 TMEM39AQ9NV64 488 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 KAT6AQ92794 2004 aa14.1□□□□□ -0.15
SYNE2-219ENST00000555323 ASAP2O43150 1006 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
SYNE2-219ENST00000555323 CKBP12277 381 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 DNM2P50570 870 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 DRP2Q13474 957 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 BFSP2Q13515 415 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 RSPH3Q86UC2 560 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 LRRC71Q8N4P6 559 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 NOC4LQ9BVI4 516 aaKnown RBP14.09□□□□□ -0.15
SYNE2-219ENST00000555323 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
SYNE2-219ENST00000555323 TRIM43BA6NCK2 446 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 EVI5O60447 810 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 TIMP1P01033 207 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 CLCN3P51790 818 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 AMPD3Q01432 767 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 FAM160A1Q05DH4 1040 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 MXD4Q14582 209 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 ELOA2Q8IYF1 753 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 CCDC155Q8N6L0 562 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 PRPF31Q8WWY3 499 aaKnown RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 TMEM143Q96AN5 459 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 C17orf75Q9HAS0 396 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-219ENST00000555323 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 ODF2LQ9ULJ1 636 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 SQORQ9Y6N5 450 aa14.08□□□□□ -0.16
SYNE2-219ENST00000555323 TRIP12Q14669 1992 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms