RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CCDC150Q8NCX0 1101 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 CD207Q9UJ71 328 aa12.48□□□□□ -0.41
SHMT2-216ENST00000554975 EMSYQ7Z589 1322 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 SORBS3O60504 671 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
SHMT2-216ENST00000554975 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 TRAPPC10P48553 1259 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 CAMK1Q14012 370 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 USH1GQ495M9 461 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-216ENST00000554975 ASCL5Q7RTU5 278 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 SERINC5Q86VE9 423 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 AOPEPQ8N6M6 819 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 KIAA1524Q8TCG1 905 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 MSLNLQ96KJ4 702 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 MYL10Q9BUA6 226 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 IFIH1Q9BYX4 1025 aaKnown RBP12.47□□□□□ -0.41
SHMT2-216ENST00000554975 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-216ENST00000554975 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
SHMT2-216ENST00000554975 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
SHMT2-216ENST00000554975 WDR87Q6ZQQ6 2873 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 LOC730098B7Z3J9 87 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 RGS20O76081 388 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 CTSHP09668 335 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 FOXK2Q01167 660 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 ADAM15Q13444 863 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 ASPRV1Q53RT3 343 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 TMTC3Q6ZXV5 915 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 SPC24Q8NBT2 197 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-216ENST00000554975 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-216ENST00000554975 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-216ENST00000554975 MPHOSPH6Q99547 160 aaKnown RBP12.46□□□□□ -0.41
SHMT2-216ENST00000554975 PRRX2Q99811 253 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 CLEC1BQ9P126 229 aa12.46□□□□□ -0.41
SHMT2-216ENST00000554975 R3HCC1Q9Y3T6 440 aaKnown RBP12.46□□□□□ -0.41
SHMT2-216ENST00000554975 H0Y858 1186 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 KIF2AO00139 706 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-216ENST00000554975 NCK2O43639 380 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-216ENST00000554975 HOXD8P13378 290 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-216ENST00000554975 DNAJB1P25685 340 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 ADGRD2Q7Z7M1 963 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 DHX40Q8IX18 779 aaKnown RBP12.45□□□□□ -0.42
SHMT2-216ENST00000554975 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
SHMT2-216ENST00000554975 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 AIFM3Q96NN9 605 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 TLR9Q9NR96 1032 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 PNMA2Q9UL42 364 aa12.45□□□□□ -0.42
SHMT2-216ENST00000554975 DNAH14Q0VDD8 3507 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 TREHO43280 583 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 CCP110O43303 1012 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 SMC2O95347 1197 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 EYA4O95677 639 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 GLP2RO95838 553 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
SHMT2-216ENST00000554975 AVPR2P30518 371 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 BMPR1AP36894 532 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 NDUFV1P49821 464 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 MYL5Q02045 173 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 CBX2Q14781 532 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-216ENST00000554975 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-216ENST00000554975 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 CCDC186Q7Z3E2 898 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 SMRP1Q8NCR6 262 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 SEPT8Q92599 483 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 C16orf70Q9BSU1 422 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 RC3H2Q9HBD1 1191 aaKnown RBP12.44□□□□□ -0.42
SHMT2-216ENST00000554975 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
SHMT2-216ENST00000554975 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
SHMT2-216ENST00000554975 DMXL1Q9Y485 3027 aa12.43□□□□□ -0.42
SHMT2-216ENST00000554975 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
SHMT2-216ENST00000554975 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
SHMT2-216ENST00000554975 B4DLN1 442 aa12.43□□□□□ -0.42
SHMT2-216ENST00000554975 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
SHMT2-216ENST00000554975 AP5Z1O43299 807 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms