RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 BMP6P22004 513 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 KIF5BP33176 963 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
SRP54-205ENST00000554803 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
SRP54-205ENST00000554803 DPYDQ12882 1025 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 ORC2Q13416 577 aaPredicted RBP12.34□□□□□ -0.43
SRP54-205ENST00000554803 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 CMTR1Q8N1G2 835 aaKnown RBP12.34□□□□□ -0.43
SRP54-205ENST00000554803 PDILTQ8N807 584 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 PRRX2Q99811 253 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 GJB4Q9NTQ9 266 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 TRMT13Q9NUP7 481 aaKnown RBP12.34□□□□□ -0.43
SRP54-205ENST00000554803 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.43
SRP54-205ENST00000554803 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.43
SRP54-205ENST00000554803 WDR87Q6ZQQ6 2873 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 A0A087WWV3 80 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 A0A1W2PQC6 194 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 GFRA3O60609 400 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 GNAQP50148 359 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 ERVK-21P61565 698 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 STIM1Q13586 685 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 NAA30Q147X3 362 aaPredicted RBP12.33□□□□□ -0.44
SRP54-205ENST00000554803 GRM4Q14833 912 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 MUM1L1Q5H9M0 696 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 CC2D1AQ6P1N0 951 aaPredicted RBP12.33□□□□□ -0.44
SRP54-205ENST00000554803 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 ANKRD35Q8N283 1001 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 IGSF22Q8N9C0 903 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 MSANTD4Q8NCY6 345 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
SRP54-205ENST00000554803 RUBCNQ92622 972 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 MKL1Q969V6 931 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 TGS1Q96RS0 853 aaKnown RBP12.33□□□□□ -0.44
SRP54-205ENST00000554803 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
SRP54-205ENST00000554803 RAB21Q9UL25 225 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 ADGRG1Q9Y653 693 aa12.33□□□□□ -0.44
SRP54-205ENST00000554803 RALGAPA2Q2PPJ7 1873 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
SRP54-205ENST00000554803 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 DYNC1LI2O43237 492 aaPredicted RBP12.32□□□□□ -0.44
SRP54-205ENST00000554803 IQCF3P0C7M6 154 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 PDHBP11177 359 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 FUT2Q10981 343 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 TCF15Q12870 199 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 SLC35G1Q2M3R5 365 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 TTC38Q5R3I4 469 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 IER5LQ5T953 404 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 TMTC3Q6ZXV5 915 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 ADHFE1Q8IWW8 467 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 CCDC12Q8WUD4 166 aaPredicted RBP12.32□□□□□ -0.44
SRP54-205ENST00000554803 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 ZNHIT6Q9NWK9 470 aaKnown RBP12.32□□□□□ -0.44
SRP54-205ENST00000554803 FBXO40Q9UH90 709 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 Q9Y3F1 56 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
SRP54-205ENST00000554803 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
SRP54-205ENST00000554803 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 RAD21O60216 631 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 NDUFB10O96000 172 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 SMPD1P17405 629 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 EEF1GP26641 437 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 IRS1P35568 1242 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 WDR5P61964 334 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 KCNB1Q14721 858 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 ZNF658Q5TYW1 1059 aaPredicted RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 APTXQ7Z2E3 356 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 HDXQ7Z353 690 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
SRP54-205ENST00000554803 LZTS2Q9BRK4 669 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 NUP58Q9BVL2 599 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
SRP54-205ENST00000554803 MTUS1Q9ULD2 1270 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms