RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KDM3AQ9Y4C1 1321 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 RFXAPO00287 272 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 P4HBP07237 508 aaKnown RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 TXKP42681 527 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 MCM2P49736 904 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 NLRP11P59045 1033 aaKnown RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 EPHA7Q15375 998 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 ODR4Q5SWX8 454 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 PLA2G4FQ68DD2 849 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 MCTP1Q6DN14 999 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 B3GNT9Q6UX72 402 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 OSMRQ99650 979 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 LXNQ9BS40 222 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 PRDM6Q9NQX0 595 aa11.96□□□□□ -0.49
SHMT2-213ENST00000554600 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.49
SHMT2-213ENST00000554600 LINC01553A4QN01 128 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 WNT7AO00755 349 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 ENPP3O14638 875 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 DNM2P50570 870 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 CTTNQ14247 550 aaKnown RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 ZNF174Q15697 407 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 CCDC85BQ15834 202 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 DYDC2Q96IM9 177 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 CCDC43Q96MW1 224 aaKnown RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 TGS1Q96RS0 853 aaKnown RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 FTHL17Q9BXU8 183 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 TTC12Q9H892 705 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 SMC3Q9UQE7 1217 aa11.95□□□□□ -0.5
SHMT2-213ENST00000554600 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 TCF20Q9UGU0 1960 aaKnown RBP11.95□□□□□ -0.5
SHMT2-213ENST00000554600 MUC3AQ02505 3323 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 TRANK1O15050 2925 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 DENND3A2RUS2 1198 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 H3BQV1 296 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 GJB2P29033 226 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 NPEPPSP55786 919 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 TARBP2Q15633 366 aaKnown RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 XKR9Q5GH70 373 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 ANO5Q75V66 913 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 OTUD6AQ7L8S5 288 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 NOSTRINQ8IVI9 506 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 TMEM40Q8WWA1 233 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 NIFKQ9BYG3 293 aaKnown RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 BACH2Q9BYV9 841 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-213ENST00000554600 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 CDH23Q9H251 3354 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 CHD7Q9P2D1 2997 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 NCOR1O75376 2440 aa11.94□□□□□ -0.5
SHMT2-213ENST00000554600 EPOPA6NHQ4 379 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 POTEMA6NI47 508 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 GPR182O15218 404 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 GPR32O75388 356 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 STBD1O95210 358 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 STAG3L1P0CL83 205 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
SHMT2-213ENST00000554600 HTRA4P83105 476 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-213ENST00000554600 SPIRE1Q08AE8 756 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 FAM228AQ86W67 206 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 RHPN2Q8IUC4 686 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 GDPD5Q8WTR4 605 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 LINC01599Q8WXQ3 324 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 ADAM2Q99965 735 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 JPH2Q9BR39 696 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-213ENST00000554600 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 ERVK-5Q9HDB9 667 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-213ENST00000554600 ST3GAL5Q9UNP4 418 aa11.93□□□□□ -0.5
SHMT2-213ENST00000554600 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 PLXNA4Q9HCM2 1894 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 MAFO75444 373 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 OR52Z1P0C646 297 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 GPC3P51654 580 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 ERVK-21P61565 698 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms