RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 C19orf47Q8N9M1 422 aaKnown RBP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 TGFBRAP1Q8WUH2 860 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 ADARB2Q9NS39 739 aaKnown RBP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 ZNF70Q9UC06 446 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 RBM8AQ9Y5S9 174 aaKnown RBP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 ASTN2O75129 1339 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 CLRN2A0PK11 232 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 FAM86C2PA6NEL3 165 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 SMIM22K7EJ46 135 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 EPB41L2O43491 1005 aaKnown RBP7.45□□□□□ -1.22
SCFD1-212ENST00000554486 ADAMTS4O75173 837 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 APPP05067 770 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 CYP2D6P10635 497 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 NECTIN1Q15223 517 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 MAPKAPK5Q8IW41 473 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 ZFPM1Q8IX07 1006 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 TP53INP2Q8IXH6 220 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 HNRNPLLQ8WVV9 542 aaKnown RBP7.45□□□□□ -1.22
SCFD1-212ENST00000554486 ARMC5Q96C12 935 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 IDI2Q9BXS1 227 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 TAF1DQ9H5J8 278 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-212ENST00000554486 MKNK2Q9HBH9 465 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 DCP1AQ9NPI6 582 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-212ENST00000554486 ATP8A2Q9NTI2 1148 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 HACL1Q9UJ83 578 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 TAF6LQ9Y6J9 622 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 LAMB1P07942 1786 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 ZMYM6O95789 1325 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 FLT1P17948 1338 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 SIPA1L1O43166 1804 aa7.45□□□□□ -1.22
SCFD1-212ENST00000554486 CYP2D7A0A087X1C5 515 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 TCP10L2B9ZVM9 353 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 SLC27A2O14975 620 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
SCFD1-212ENST00000554486 EPHX2P34913 555 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 HSPA4P34932 840 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 CCNFP41002 786 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 TDO2P48775 406 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 PICALMQ13492 652 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 SBK1Q52WX2 424 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 FKBP1CQ5VVH2 108 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 CREB3L3Q68CJ9 461 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 CTR9Q6PD62 1173 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 ANKS3Q6ZW76 656 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 PPFIBP1Q86W92 1011 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 AGBL5Q8NDL9 886 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 NETO1Q8TDF5 533 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 NACAP1Q9BZK3 213 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 OSBPL5Q9H0X9 879 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-212ENST00000554486 NAPBQ9H115 298 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 SAP30BPQ9UHR5 308 aaKnown RBP7.44□□□□□ -1.22
SCFD1-212ENST00000554486 CTNNA3Q9UI47 895 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 PALD1Q9ULE6 856 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 SCAF8Q9UPN6 1271 aaKnown RBP7.44□□□□□ -1.22
SCFD1-212ENST00000554486 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 CNTNAP1P78357 1384 aa7.44□□□□□ -1.22
SCFD1-212ENST00000554486 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 MYO1BO43795 1136 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 LRRN2O75325 713 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 ENTPD3O75355 529 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 CYP21A2P08686 494 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 OXCT1P55809 520 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 HAND2P61296 217 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 TCP10Q12799 353 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 ANGEL2Q5VTE6 544 aaKnown RBP7.43□□□□□ -1.22
SCFD1-212ENST00000554486 MCTP1Q6DN14 999 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 USP50Q70EL3 339 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-212ENST00000554486 FAM83AQ86UY5 434 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 TBC1D10CQ8IV04 446 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 FLCNQ8NFG4 579 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 FAM151AQ8WW52 585 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 IL17RAQ96F46 866 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 Q96M66 194 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 SLC6A18Q96N87 628 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 VEZTQ9HBM0 779 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 NMRK2Q9NPI5 230 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 MCM9Q9NXL9 1143 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 GGA3Q9NZ52 723 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 TMOD2Q9NZR1 351 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 PGAP2Q9UHJ9 254 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 GTF2IRD1Q9UHL9 959 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 ANAPC4Q9UJX5 808 aa7.43□□□□□ -1.22
SCFD1-212ENST00000554486 COL2A1P02458 1487 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-212ENST00000554486 DDTLA6NHG4 134 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 C9IYK1 514 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 IGF2BP3O00425 579 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 STK10O94804 968 aaKnown RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 VEGFAP15692 232 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 GBP1P32455 592 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 PLCD1P51178 756 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms