RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 BRMS1Q9HCU9 246 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 TBX3O15119 743 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 ZNF862O60290 1169 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 OATP04181 439 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 KRT2P35908 639 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 PRKCEQ02156 737 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 LETM2Q2VYF4 491 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 ODR4Q5SWX8 454 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 KIAA0319LQ8IZA0 1049 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 PIEZO1Q92508 2521 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 KCNMB3Q9NPA1 279 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
PTCD2P1-201ENST00000554393 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 ENPP3O14638 875 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 CHMP2AO43633 222 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 SLC37A4O43826 429 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 LPXNO60711 386 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 CD52P31358 61 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 PAK2Q13177 524 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 GRB10Q13322 594 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 ALYREFQ86V81 257 aaKnown RBP11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 LINC01465Q8N7H1 131 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 TNFRSF25Q93038 417 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 RC3H2Q9HBD1 1191 aaKnown RBP11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 GJB4Q9NTQ9 266 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 PADI3Q9ULW8 664 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
PTCD2P1-201ENST00000554393 ADGRA3Q8IWK6 1321 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 RFXAPO00287 272 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 UPP2O95045 317 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 MMP1P03956 469 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 TMOD1P28289 359 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 CRYBB1P53674 252 aaPredicted RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 TRIM29Q14134 588 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 TARBP2Q15633 366 aaKnown RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 UGCGQ16739 394 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 XKR3Q5GH77 459 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 OXER1Q8TDS5 423 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 ATXN2LQ8WWM7 1075 aaKnown RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 LINC01599Q8WXQ3 324 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 MAP7D2Q96T17 732 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 LLPHQ9BRT6 129 aaKnown RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 NIFKQ9BYG3 293 aaKnown RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 RWDD3Q9Y3V2 267 aa11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.53
PTCD2P1-201ENST00000554393 ATG2AQ2TAZ0 1938 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 GPR182O15218 404 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 JAK2O60674 1132 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 DKC1O60832 514 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 GPR32O75388 356 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 EFCAB12Q6NXP0 572 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 NPAS4Q8IUM7 802 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 SLFN12Q8IYM2 578 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 METTL13Q8N6R0 699 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 PPM1EQ8WY54 764 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 GJA10Q969M2 543 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 ZSCAN31Q96LW9 406 aaPredicted RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 REV3LO60673 3130 aa11.7□□□□□ -0.54
PTCD2P1-201ENST00000554393 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 DGKIO75912 1065 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 STBD1O95210 358 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 STAG3L1P0CL83 205 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 CLCN3P51790 818 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 PSMC5P62195 406 aa11.69□□□□□ -0.54
PTCD2P1-201ENST00000554393 CDC42EP1Q00587 391 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms