RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 TEX51A0A1B0GUA7 166 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 PEX10O60683 326 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 CYP2C8P10632 490 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 RBP3P10745 1247 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 FOXO4P98177 505 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 ADAM9Q13443 819 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 SMAD4Q13485 552 aaKnown RBP6.89□□□□□ -1.31
CHD8-207ENST00000554384 TARBP2Q15633 366 aaKnown RBP6.89□□□□□ -1.31
CHD8-207ENST00000554384 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
CHD8-207ENST00000554384 PITRM1Q5JRX3 1037 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 LYSMD2Q8IV50 215 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 STPG3Q8N7X2 389 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 RNF38Q9H0F5 515 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 TMPRSS11EQ9UL52 423 aa6.89□□□□□ -1.31
CHD8-207ENST00000554384 NOB1Q9ULX3 412 aaKnown RBP6.89□□□□□ -1.31
CHD8-207ENST00000554384 DBX1A6NMT0 343 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 CCND1P24385 295 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 ECE1P42892 770 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 IL13RA1P78552 427 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 ADCY2Q08462 1091 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 TRIM25Q14258 630 aaKnown RBP6.88□□□□□ -1.31
CHD8-207ENST00000554384 ACAP2Q15057 778 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 TIGD7Q6NT04 549 aaPredicted RBP6.88□□□□□ -1.31
CHD8-207ENST00000554384 NME9Q86XW9 330 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 FOXB1Q99853 325 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 DNAJC28Q9NX36 388 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 ARHGAP20Q9P2F6 1191 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 TCEAL9Q9UHQ7 104 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 ZFP69BQ9UJL9 534 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
CHD8-207ENST00000554384 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
CHD8-207ENST00000554384 N4BP3O15049 544 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 XPOTO43592 962 aaKnown RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 TSPAN6O43657 245 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 FARP2O94887 1054 aaPredicted RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 PCDH8O95206 1070 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 CELA3BP08861 270 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 OSMP13725 252 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 PFKLP17858 780 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 ENPP1P22413 925 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 DLG4P78352 724 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 ROM1Q03395 351 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 PIN1Q13526 163 aaPredicted RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 PPP2R5AQ15172 486 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 FSCN1Q16658 493 aaKnown RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 UGT8Q16880 541 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 PNMA8AQ86V59 439 aaPredicted RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 WDR75Q8IWA0 830 aaKnown RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 KCNN1Q92952 543 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 ORAI2Q96SN7 254 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 USP36Q9P275 1121 aaKnown RBP6.87□□□□□ -1.31
CHD8-207ENST00000554384 ZNF180Q9UJW8 692 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 CROTQ9UKG9 612 aa6.87□□□□□ -1.31
CHD8-207ENST00000554384 ETV2O00321 342 aaPredicted RBP6.86□□□□□ -1.31
CHD8-207ENST00000554384 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
CHD8-207ENST00000554384 ZSCAN20P17040 1043 aaPredicted RBP6.86□□□□□ -1.31
CHD8-207ENST00000554384 ADCY8P40145 1251 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 CCT2P78371 535 aaKnown RBP6.86□□□□□ -1.31
CHD8-207ENST00000554384 HTRA3P83110 453 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 CD83Q01151 205 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 KIAA1841Q6NSI8 718 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 TMEFF1Q8IYR6 380 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 JADE3Q92613 823 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 ACAP3Q96P50 834 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 RHOBTB2Q9BYZ6 727 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 KCTD10Q9H3F6 313 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 NGRNQ9NPE2 291 aaKnown RBP6.86□□□□□ -1.31
CHD8-207ENST00000554384 DLL4Q9NR61 685 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 FAM53CQ9NYF3 392 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 SPEF1Q9Y4P9 236 aa6.86□□□□□ -1.31
CHD8-207ENST00000554384 TRIM75PA6NK02 468 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 ABLIM3O94929 683 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 SNUPNO95149 360 aaKnown RBP6.85□□□□□ -1.31
CHD8-207ENST00000554384 CFBP00751 764 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 LGALS4P56470 323 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 ANTXR2P58335 489 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD8-207ENST00000554384 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 TTLL7Q6ZT98 887 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 KCNK18Q7Z418 384 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 TPH2Q8IWU9 490 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 PPM1NQ8N819 430 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
CHD8-207ENST00000554384 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
CHD8-207ENST00000554384 E2F7Q96AV8 911 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 ZBTB8AQ96BR9 441 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 SLC13A1Q9BZW2 595 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 CDH19Q9H159 772 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 MTG2Q9H4K7 406 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms