RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PSME4Q14997 1843 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 IGF2BP3O00425 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 TPM1P09493 284 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ZSCAN20P17040 1043 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF165P49910 485 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 SP3Q02447 781 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CRHR2Q13324 411 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ME3Q16798 604 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 TTLL5Q6EMB2 1281 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 GIMAP6Q6P9H5 292 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CCDC73Q6ZRK6 1079 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 NOL8Q76FK4 1167 aaKnown RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 TTC6Q86TZ1 520 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 REXO1Q8N1G1 1221 aaKnown RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 FBXL16Q8N461 479 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CCDC150Q8NCX0 1101 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 FAM13CQ8NE31 585 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF397Q8NF99 534 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CD99L2Q8TCZ2 262 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 LEO1Q8WVC0 666 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 GTF3C6Q969F1 213 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ZBED3Q96IU2 234 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 MYD88Q99836 296 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 BPIFA3Q9BQP9 254 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 NOL10Q9BSC4 688 aaKnown RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 DEFB129Q9H1M3 183 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 ANO10Q9NW15 660 aa6.77□□□□□ -1.33
VPS33B-203ENST00000554264 CWC25Q9NXE8 425 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 RBBP6Q7Z6E9 1792 aaKnown RBP6.77□□□□□ -1.33
VPS33B-203ENST00000554264 PI4KAP2A4QPH2 592 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 H3BQV1 296 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 GRM8O00222 908 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 SLC27A2O14975 620 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 TNNI2P48788 182 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 CTSWP56202 376 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 NEXNQ0ZGT2 675 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 BNIP3Q12983 259 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 DLGAP5Q15398 846 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 ZRSR1Q15695 479 aaKnown RBP6.76□□□□□ -1.33
VPS33B-203ENST00000554264 NKPD1Q17RQ9 610 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 SLC4A8Q2Y0W8 1093 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 SLC9C1Q4G0N8 1177 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 TSHZ3Q63HK5 1081 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 ZSCAN25Q6NSZ9 544 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 PI4KAP1Q8N8J0 262 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 BICD2Q8TD16 824 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF333Q96JL9 665 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 CLMNQ96JQ2 1002 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 MXD3Q9BW11 206 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 SRRTQ9BXP5 876 aaKnown RBP6.76□□□□□ -1.33
VPS33B-203ENST00000554264 CLIP2Q9UDT6 1046 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 CEP131Q9UPN4 1083 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF804BA4D1E1 1349 aa6.76□□□□□ -1.33
VPS33B-203ENST00000554264 A0A1W2PQ27 194 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 A0A1W2PQ64 194 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 A0A1W2PQD8 194 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 GOLGA6L9A6NEM1 432 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 BECN2A8MW95 431 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ATP8B1O43520 1251 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 KINO60870 393 aaKnown RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 WDHD1O75717 1129 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 PRNPP04156 253 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 NBPF7P0C2Y1 421 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TNNT1P13805 278 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TCF3P15923 654 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ATP5JP18859 108 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ITIH2P19823 946 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TUBB4BP68371 445 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 PTPN14Q15678 1187 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TPD52L1Q16890 204 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 CCDC186Q7Z3E2 898 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 AACSQ86V21 672 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 SPACA3Q8IXA5 215 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ANKRD13AQ8IZ07 590 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 KRT222Q8N1A0 295 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TTLL11Q8NHH1 800 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 KIF18AQ8NI77 898 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 NETO1Q8TDF5 533 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 FSD1Q9BTV5 496 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TGIF2Q9GZN2 237 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ANKRD2Q9GZV1 360 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TSPYL1Q9H0U9 437 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 OSBPL5Q9H0X9 879 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 PHAXQ9H814 394 aaKnown RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 PRDM5Q9NQX1 630 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 ARGLU1Q9NWB6 273 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 DACT1Q9NYF0 836 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms