RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 H7C1D1 291 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 DNAJC8O75937 253 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-210ENST00000553693 ZBTB48P10074 688 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-210ENST00000553693 KIF11P52732 1056 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 ROM1Q03395 351 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 PRKD1Q15139 912 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-210ENST00000553693 UBE2R2Q712K3 238 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-210ENST00000553693 SPRED1Q7Z699 444 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 FUKQ8N0W3 1084 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 OR14A2Q96R54 314 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 DPYSL5Q9BPU6 564 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 TMEM260Q9NX78 707 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 VWA7Q9Y334 891 aa5.95□□□□□ -1.46
SCFD1-210ENST00000553693 TNPO3Q9Y5L0 923 aaKnown RBP5.95□□□□□ -1.46
SCFD1-210ENST00000553693 RFPL3O75679 317 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 TACR2P21452 398 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 SESN2P58004 480 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-210ENST00000553693 ZNF174Q15697 407 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 CCDC144BQ3MJ40 725 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 RTN4RL1Q86UN2 441 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-210ENST00000553693 EDAQ92838 391 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 FAM89AQ96GI7 184 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 ADOQ96SZ5 270 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 PLA2G12BQ9BX93 195 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 FAM184BQ9ULE4 1060 aa5.94□□□□□ -1.46
SCFD1-210ENST00000553693 UBA6A0AVT1 1052 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-210ENST00000553693 PTPDC1A2A3K4 754 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 SLPIP03973 132 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 CYP17A1P05093 508 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 C6P13671 934 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 TBR1Q16650 682 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 SPDYAQ5MJ70 313 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 PIK3R6Q5UE93 754 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 NME9Q86XW9 330 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 CFHR4Q92496 578 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 LPPQ93052 612 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 FOXRED1Q96CU9 486 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-210ENST00000553693 VPS11Q9H270 941 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 NELFAQ9H3P2 528 aa5.93□□□□□ -1.46
SCFD1-210ENST00000553693 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
SCFD1-210ENST00000553693 MAGEC2Q9UBF1 373 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-210ENST00000553693 PMS2P1A4D2B8 440 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 MATN2O00339 956 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 ASMTLO95671 621 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 PRLP01236 227 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 STAT5BP51692 787 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 SLC6A3Q01959 620 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 ZNF460Q14592 562 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 NOLC1Q14978 699 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCFD1-210ENST00000553693 SLFN12LQ6IEE8 588 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 CRIP3Q6Q6R5 217 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 KIAA1958Q8N8K9 716 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 OR14K1Q8NGZ2 314 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 WDR26Q9H7D7 661 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-210ENST00000553693 B4GALT6Q9UBX8 382 aa5.92□□□□□ -1.46
SCFD1-210ENST00000553693 CBX4O00257 560 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 PPP1R12AO14974 1030 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-210ENST00000553693 SLC26A4O43511 780 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 H2AFYO75367 372 aaKnown RBP5.91□□□□□ -1.46
SCFD1-210ENST00000553693 JMJD7P0C870 316 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 ACO1P21399 889 aaKnown RBP5.91□□□□□ -1.46
SCFD1-210ENST00000553693 HGFACQ04756 655 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 DUSP8Q13202 625 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 PABPC4Q13310 644 aaKnown RBP eCLIP5.91□□□□□ -1.46
SCFD1-210ENST00000553693 EPHA7Q15375 998 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 TCEA2Q15560 299 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 CFAP100Q494V2 611 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 TTC38Q5R3I4 469 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 KLHDC10Q6PID8 442 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 USP51Q70EK9 711 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 OR5AN1Q8NGI8 311 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 MRIQ9BWK5 157 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 SLITRK6Q9H5Y7 841 aa5.91□□□□□ -1.46
SCFD1-210ENST00000553693 TRAF5O00463 557 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 GDF5P43026 501 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 HHEXQ03014 270 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 DGKDQ16760 1214 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 RNF207Q6ZRF8 634 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 SHCBP1Q8NEM2 672 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
SCFD1-210ENST00000553693 GFM2Q969S9 779 aaKnown RBP5.9□□□□□ -1.46
SCFD1-210ENST00000553693 SLC7A6OSQ96CW6 309 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-210ENST00000553693 MAML3Q96JK9 1138 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 KANSL2Q9H9L4 492 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 KCMF1Q9P0J7 381 aa5.9□□□□□ -1.46
SCFD1-210ENST00000553693 CTDP1Q9Y5B0 961 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-210ENST00000553693 DVL2O14641 736 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 MAFGO15525 162 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 FZD7O75084 574 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 SDSP20132 328 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 RGS3P49796 1198 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 BCAR1P56945 870 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 ADCY1Q08828 1119 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 CRB2Q5IJ48 1285 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 PRAMEF9Q5VWM5 478 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 CDCA2Q69YH5 1023 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-210ENST00000553693 ADGRE4PQ86SQ3 457 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms