RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 CTAGE1Q96RT6 745 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 JPH1Q9HDC5 661 aaPredicted RBP12.11□□□□□ -0.47
CNIH1-203ENST00000553660 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 A0A1W2PRU2 124 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 M0R2N6 131 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 CAND2O75155 1236 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 LGR5O75473 907 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 ATG7O95352 703 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 ZNF286BP0CG31 522 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 GNAT1P11488 350 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 CSF2RAP15509 400 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 XBP1P17861 261 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 CYP2C18P33260 490 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 CTSOP43234 321 aaPredicted RBP12.1□□□□□ -0.47
CNIH1-203ENST00000553660 SLC26A2P50443 739 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 EPHB4P54760 987 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 NLRP5P59047 1200 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 C9orf50Q5SZB4 431 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 GDF6Q6KF10 455 aaPredicted RBP12.1□□□□□ -0.47
CNIH1-203ENST00000553660 MOXD1Q6UVY6 613 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 C16orf59Q7L2K0 433 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 SDF4Q9BRK5 362 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 WNT8AQ9H1J5 351 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
CNIH1-203ENST00000553660 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
CNIH1-203ENST00000553660 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
CNIH1-203ENST00000553660 TMEM260Q9NX78 707 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 HDAC6Q9UBN7 1215 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 SLC9A2Q9UBY0 812 aa12.1□□□□□ -0.47
CNIH1-203ENST00000553660 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 SOX1O00570 391 aaPredicted RBP12.09□□□□□ -0.47
CNIH1-203ENST00000553660 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
CNIH1-203ENST00000553660 IQCF3P0C7M6 154 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 CYP2C9P11712 490 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 CYP3A7P24462 503 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 TCF7P36402 384 aaPredicted RBP12.09□□□□□ -0.47
CNIH1-203ENST00000553660 ZNF76P36508 570 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 STK3Q13188 491 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 NPY5RQ15761 445 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 ME3Q16798 604 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
CNIH1-203ENST00000553660 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.09□□□□□ -0.475e-8■□□□□ 8.8
CNIH1-203ENST00000553660 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 MAFBQ9Y5Q3 323 aaPredicted RBP12.09□□□□□ -0.47
CNIH1-203ENST00000553660 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
CNIH1-203ENST00000553660 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.08□□□□□ -0.48
CNIH1-203ENST00000553660 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.08□□□□□ -0.48
CNIH1-203ENST00000553660 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 MEN1O00255 615 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
CNIH1-203ENST00000553660 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 ARP10275 920 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 SELPP16109 830 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 ADAM17P78536 824 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
CNIH1-203ENST00000553660 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 LENG9Q96B70 501 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 MBOAT7Q96N66 472 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 KIF2CQ99661 725 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
CNIH1-203ENST00000553660 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
CNIH1-203ENST00000553660 EDIL3O43854 480 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 MAN1A2O60476 641 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 FGBP02675 491 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 CXCL10P02778 98 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 SMIM10L2AP0DMW4 78 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 SMIM10L2BP0DMW5 78 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 CKBP12277 381 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 ACTR2P61160 394 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 CLN3Q13286 438 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 TRIM71Q2Q1W2 868 aaKnown RBP12.07□□□□□ -0.48
CNIH1-203ENST00000553660 Q4G0T1 1027 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
CNIH1-203ENST00000553660 TAF2Q6P1X5 1199 aa12.07□□□□□ -0.48
CNIH1-203ENST00000553660 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
CNIH1-203ENST00000553660 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms