RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TTC39CQ8N584 583 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 CENPTQ96BT3 561 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 ARMC7Q9H6L4 198 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 AQRO60306 1485 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■□□□□ 11.3
GTF2A1-203ENST00000553612 CCDC169A6NNP5 214 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CLPTM1O96005 669 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ATXN3P54252 364 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 PARP10Q53GL7 1025 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TTMPQ5BVD1 217 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ZNF662Q6ZS27 426 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CLVS1Q8IUQ0 354 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MRPL50Q8N5N7 158 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MAGEC3Q8TD91 643 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 NOC4LQ9BVI4 516 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 GOLPH3LQ9H4A5 285 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 UBN2Q6ZU65 1347 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CLK3P49761 638 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 THOC5Q13769 683 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 QPCTQ16769 361 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 STK32CQ86UX6 486 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ANKRD44Q8N8A2 993 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 SLC26A7Q8TE54 656 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ERP27Q96DN0 273 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 LRRC37BQ96QE4 947 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 HYOU1Q9Y4L1 999 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TRIM16O95361 564 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 APOA4P06727 396 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TFPTP0C1Z6 253 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 DBTP11182 482 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TCEA1P23193 301 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CIITAP33076 1130 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ATP6V1E1P36543 226 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 AP2B1P63010 937 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TBC1D10BQ4KMP7 808 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ANO7Q6IWH7 933 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ZNF579Q8NAF0 562 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 GSDMAQ96QA5 445 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CNPY3Q9BT09 278 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 PITPNM3Q9BZ71 974 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 RABGEF1Q9UJ41 708 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ARHGAP26Q9UNA1 814 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 COQ6Q9Y2Z9 468 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 SLC4A4Q9Y6R1 1079 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MATN2O00339 956 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 KRIT1O00522 736 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MAPK13O15264 365 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 HMOX2P30519 316 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CTC1Q2NKJ3 1217 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 USH1GQ495M9 461 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ARSHQ5FYA8 562 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 PPP6R3Q5H9R7 873 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 PEX26Q7Z412 305 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 SPC25Q9HBM1 224 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 CIDEBQ9UHD4 219 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 APPL1Q9UKG1 709 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 EPN1Q9Y6I3 576 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 GNA14O95837 355 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 NPPAP01160 153 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT16P08779 473 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 HPCAP84074 193 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 EZH2Q15910 746 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 TTC8Q8TAM2 541 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ANKRD49Q8WVL7 239 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 NOX5Q96PH1 765 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 NT5C3AQ9H0P0 336 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 FGFR1OP2Q9NVK5 253 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 COMMD10Q9Y6G5 202 aa9.62□□□□□ -0.87
GTF2A1-203ENST00000553612 ZW10O43264 779 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 KATNA1O75449 491 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ITGALP20701 1170 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 USP11P51784 963 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PDE4BQ07343 736 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 INPP5DQ92835 1189 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PANX2Q96RD6 677 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 CAAP1Q9H8G2 361 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PACSIN2Q9UNF0 486 aaPredicted RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 WEE1P30291 646 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 TUBP50607 506 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ZNF174Q15697 407 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 SPATA18Q8TC71 538 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PHKBQ93100 1093 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 SIPA1Q96FS4 1042 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 HEPHQ9BQS7 1158 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 IRF2BPLQ9H1B7 796 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 FBXO40Q9UH90 709 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 DCTN4Q9UJW0 460 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms