RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RGL1Q9NZL6 768 aa26.48■■□□□ 1.83
TDP1-205ENST00000553527 INSL6Q9Y581 213 aa26.48■■□□□ 1.83
TDP1-205ENST00000553527 STBD1O95210 358 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 HSP90AA1P07900 732 aaKnown RBP26.47■■□□□ 1.83
TDP1-205ENST00000553527 CYP4A11Q02928 519 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 BECN1Q14457 450 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 EPHA7Q15375 998 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 ZNF174Q15697 407 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 PLA2G4FQ68DD2 849 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 INTS4Q96HW7 963 aaKnown RBP26.47■■□□□ 1.83
TDP1-205ENST00000553527 DYDC2Q96IM9 177 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 MAP7D2Q96T17 732 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 YME1L1Q96TA2 773 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 NIFKQ9BYG3 293 aaKnown RBP26.47■■□□□ 1.83
TDP1-205ENST00000553527 TTC12Q9H892 705 aaPredicted RBP26.47■■□□□ 1.83
TDP1-205ENST00000553527 MTUS1Q9ULD2 1270 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 NOC2LQ9Y3T9 749 aaKnown RBP26.47■■□□□ 1.83
TDP1-205ENST00000553527 SQORQ9Y6N5 450 aa26.47■■□□□ 1.83
TDP1-205ENST00000553527 KDM3AQ9Y4C1 1321 aa26.46■■□□□ 1.83
TDP1-205ENST00000553527 RPS6KA5O75582 802 aa26.46■■□□□ 1.83
TDP1-205ENST00000553527 P4HBP07237 508 aaKnown RBP26.46■■□□□ 1.83
TDP1-205ENST00000553527 NLRP11P59045 1033 aaKnown RBP26.46■■□□□ 1.83
TDP1-205ENST00000553527 ADGRE1Q14246 886 aa26.46■■□□□ 1.83
TDP1-205ENST00000553527 CTTNQ14247 550 aaKnown RBP26.46■■□□□ 1.83
TDP1-205ENST00000553527 SLC17A8Q8NDX2 589 aa26.46■■□□□ 1.83
TDP1-205ENST00000553527 TMEM40Q8WWA1 233 aa26.46■■□□□ 1.83
TDP1-205ENST00000553527 TARBP2Q15633 366 aaKnown RBP26.45■■□□□ 1.82
TDP1-205ENST00000553527 ANO5Q75V66 913 aa26.45■■□□□ 1.82
TDP1-205ENST00000553527 TPH2Q8IWU9 490 aa26.45■■□□□ 1.82
TDP1-205ENST00000553527 TMEM60Q9H2L4 133 aa26.45■■□□□ 1.82
TDP1-205ENST00000553527 FOXD4L1Q9NU39 408 aa26.45■■□□□ 1.82
TDP1-205ENST00000553527 WRAP73Q9P2S5 460 aaPredicted RBP26.45■■□□□ 1.82
TDP1-205ENST00000553527 DKC1O60832 514 aaKnown RBP eCLIP26.44■■□□□ 1.82
TDP1-205ENST00000553527 GPR32O75388 356 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 CRYBB1P53674 252 aaPredicted RBP26.44■■□□□ 1.82
TDP1-205ENST00000553527 NPEPPSP55786 919 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 SPIRE1Q08AE8 756 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 RTN4RL1Q86UN2 441 aaPredicted RBP26.44■■□□□ 1.82
TDP1-205ENST00000553527 NOSTRINQ8IVI9 506 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 SCLT1Q96NL6 688 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 LXNQ9BS40 222 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 TTC3P53804 2025 aa26.44■■□□□ 1.82
TDP1-205ENST00000553527 LINC01553A4QN01 128 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 EPOPA6NHQ4 379 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 DRP2Q13474 957 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 CCDC85BQ15834 202 aaPredicted RBP26.43■■□□□ 1.82
TDP1-205ENST00000553527 MCTP1Q6DN14 999 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 LINC01599Q8WXQ3 324 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 MTMR9Q96QG7 549 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 EIF2AK1Q9BQI3 630 aaKnown RBP26.43■■□□□ 1.82
TDP1-205ENST00000553527 FTHL17Q9BXU8 183 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 TMX1Q9H3N1 280 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 ST3GAL5Q9UNP4 418 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 PRUNE2Q8WUY3 3088 aa26.43■■□□□ 1.82
TDP1-205ENST00000553527 HTRA4P83105 476 aaPredicted RBP26.42■■□□□ 1.82
TDP1-205ENST00000553527 NBR1Q14596 966 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 TTC38Q5R3I4 469 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 MICALL1Q8N3F8 863 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 LINC01465Q8N7H1 131 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 ZNF579Q8NAF0 562 aaKnown RBP26.42■■□□□ 1.82
TDP1-205ENST00000553527 CEP170P1Q96L14 293 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 ERVK-5Q9HDB9 667 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 CYP26B1Q9NR63 512 aa26.42■■□□□ 1.82
TDP1-205ENST00000553527 BMP2KQ9NSY1 1161 aaPredicted RBP26.42■■□□□ 1.82
TDP1-205ENST00000553527 NOL7Q9UMY1 257 aaKnown RBP26.42■■□□□ 1.82
TDP1-205ENST00000553527 ZBTB39O15060 712 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 GPR182O15218 404 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 YWHABP31946 246 aaKnown RBP26.41■■□□□ 1.82
TDP1-205ENST00000553527 DNM2P50570 870 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 NLRP7Q8WX94 980 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 CEP89Q96ST8 783 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 ZSWIM4Q9H7M6 989 aa26.41■■□□□ 1.82
TDP1-205ENST00000553527 POTEMA6NI47 508 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 SLITRK3O94933 977 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 ANP32AP39687 249 aaKnown RBP26.4■■□□□ 1.82
TDP1-205ENST00000553527 TECP42680 631 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 ODR4Q5SWX8 454 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 OTUD6AQ7L8S5 288 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 FAM228AQ86W67 206 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 C4orf19Q8IY42 314 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 TGS1Q96RS0 853 aaKnown RBP26.4■■□□□ 1.82
TDP1-205ENST00000553527 ADAMTS10Q9H324 1103 aa26.4■■□□□ 1.82
TDP1-205ENST00000553527 SUCLA2Q9P2R7 463 aaPredicted RBP26.4■■□□□ 1.82
TDP1-205ENST00000553527 NLRC5Q86WI3 1866 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 DENND3A2RUS2 1198 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 H3BQV1 296 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 MAFO75444 373 aaPredicted RBP26.39■■□□□ 1.82
TDP1-205ENST00000553527 GPC3P51654 580 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 XKR9Q5GH70 373 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 ADAM2Q99965 735 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 C17orf80Q9BSJ5 609 aa26.39■■□□□ 1.82
TDP1-205ENST00000553527 ARID2Q68CP9 1835 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 A0A087WWV3 80 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 MGEA5O60502 916 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 CSDE1O75534 798 aaKnown RBP26.38■■□□□ 1.81
TDP1-205ENST00000553527 OR52Z1P0C646 297 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 U2AF2P26368 475 aaKnown RBP eCLIP26.38■■□□□ 1.81
TDP1-205ENST00000553527 POLGP54098 1239 aaPredicted RBP26.38■■□□□ 1.81
TDP1-205ENST00000553527 RHPN2Q8IUC4 686 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 TSPYL2Q9H2G4 693 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms