RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ALCAMQ13740 583 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 PPP2R5AQ15172 486 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 NBPF9Q3BBW0 867 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 SPDYE2Q495Y8 402 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 EAPPQ56P03 285 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-205ENST00000553474 HS2ST1Q7LGA3 356 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 EIF1ADQ8N9N8 165 aaKnown RBP14.12□□□□□ -0.15
SHMT2-205ENST00000553474 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 SELENOOQ9BVL4 669 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 RUSC1Q9BVN2 902 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 VEZTQ9HBM0 779 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 MAP3K20Q9NYL2 800 aaKnown RBP14.12□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF70Q9UC06 446 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-205ENST00000553474 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 RPS6KA5O75582 802 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PRPF6O94906 941 aaKnown RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 KLRC1P26715 233 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 EPHX2P34913 555 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 TNNT3P45378 269 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 JAM2P57087 298 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 SNAP25P60880 206 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 GHRHRQ02643 423 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 C8orf74Q6P047 294 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 VTI1AQ96AJ9 217 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 BORCS6Q96GS4 357 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 WDR18Q9BV38 432 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 RRAGCQ9HB90 399 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 ADARB2Q9NS39 739 aaKnown RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 CWC15Q9P013 229 aaKnown RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PNMA2Q9UL42 364 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 ASTN2O75129 1339 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 WNT10BO00744 389 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 BUB1O43683 1085 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PALMO75781 387 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 MAPTP10636 758 aaKnown RBP14.11□□□□□ -0.15
SHMT2-205ENST00000553474 ECE1P42892 770 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 NPEPPSP55786 919 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 MAP3K10Q02779 954 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PTK2Q05397 1052 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 SLC9A9Q8IVB4 645 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 IFT20Q8IY31 132 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 MYCT1Q8N699 235 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 CYP2W1Q8TAV3 490 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 CAVIN3Q969G5 261 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 PBKQ96KB5 322 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 DRC1Q96MC2 740 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 LRRC1Q9BTT6 524 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
SHMT2-205ENST00000553474 TGFB1I1O43294 461 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 ASNSP08243 561 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 SLC9A1P19634 815 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 DCAF17Q5H9S7 520 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-205ENST00000553474 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF720Q7Z2F6 126 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 FAM186BQ8IYM0 893 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 SYCE1Q8N0S2 351 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 DYDC2Q96IM9 177 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 CALR3Q96L12 384 aaKnown RBP14.1□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF577Q9BSK1 485 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 RGL1Q9NZL6 768 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 GCNT4Q9P109 453 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 NENFQ9UMX5 172 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 SCAF8Q9UPN6 1271 aaKnown RBP14.1□□□□□ -0.15
SHMT2-205ENST00000553474 FRMD4BQ9Y2L6 1034 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 FAN1Q9Y2M0 1017 aa14.1□□□□□ -0.15
SHMT2-205ENST00000553474 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ZMYM2Q9UBW7 1377 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 A6NNZ2 444 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 RSPH10B2B2RC85 870 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TCP10L2B9ZVM9 353 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 RSPH10BP0C881 870 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ACTN2P35609 894 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 STAT1P42224 750 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 HSD17B4P51659 736 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 SNRPFP62306 86 aaKnown RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 APBA1Q02410 837 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TUBB8Q3ZCM7 444 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TCERG1LQ5VWI1 586 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ALKBH5Q6P6C2 394 aaKnown RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ACER1Q8TDN7 264 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TAF4BQ92750 862 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 DMAC2Q9NW81 257 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 GGA3Q9NZ52 723 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ERICH4A6NGS2 130 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms