RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 HBP1O60381 514 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 SRGAP2BP0DMP2 458 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 ARP10275 920 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 KLRC1P26715 233 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 CLCN1P35523 988 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 SREBF1P36956 1147 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 NRIP1P48552 1158 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 ITGB3BPQ13352 177 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
ACTN1-208ENST00000553370 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 CYP2W1Q8TAV3 490 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 ATP8B4Q8TF62 1192 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 P2RX5Q93086 422 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 PCYT2Q99447 389 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 ZNF577Q9BSK1 485 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 C6orf50Q9HD87 102 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 COL1A2P08123 1366 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 CDC45O75419 566 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 ITGB1P05556 798 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 CA8P35219 290 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 SARSP49591 514 aaKnown RBP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 GATMP50440 423 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 BMP2KLQ5H9B9 411 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 ABI1Q8IZP0 508 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 LINC01599Q8WXQ3 324 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 ARID3AQ99856 593 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 RC3H2Q9HBD1 1191 aaKnown RBP11.24□□□□□ -0.61
ACTN1-208ENST00000553370 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
ACTN1-208ENST00000553370 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 IPO5O00410 1097 aaKnown RBP11.23□□□□□ -0.61
ACTN1-208ENST00000553370 MEIS1O00470 390 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 GPR182O15218 404 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 LINC01565O15544 149 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 MBTPS2O43462 519 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 TBX10O75333 385 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 PSAPP07602 524 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 TMOD1P28289 359 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 SMAD2Q15796 467 aaKnown RBP11.23□□□□□ -0.61
ACTN1-208ENST00000553370 KIZQ2M2Z5 673 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 NIPA1Q7RTP0 329 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-208ENST00000553370 RNF169Q8NCN4 708 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 OSMRQ99650 979 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 ADAM2Q99965 735 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 TLE6Q9H808 572 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 NPDC1Q9NQX5 325 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-208ENST00000553370 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 MUTYHQ9UIF7 546 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 CEP131Q9UPN4 1083 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
ACTN1-208ENST00000553370 CCNE2O96020 404 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 VTNP04004 478 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 GNA11P29992 359 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 IRS1P35568 1242 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 LTBRP36941 435 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 DLX2Q07687 328 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 COL9A3Q14050 684 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 PRR16Q569H4 304 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 SLC24A5Q71RS6 500 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 ADGRD2Q7Z7M1 963 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 EFHBQ8N7U6 833 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 FAM167AQ96KS9 214 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 MFSD14AQ96MC6 490 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 JAKMIP1Q96N16 626 aaKnown RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 TBC1D22BQ9NU19 505 aa11.22□□□□□ -0.61
ACTN1-208ENST00000553370 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms