RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SLC12A7Q9Y666 1083 aa10.35□□□□□ -0.75
SYNE2-209ENST00000553308 COL1A2P08123 1366 aa10.35□□□□□ -0.75
SYNE2-209ENST00000553308 C2CD4DB7Z1M9 353 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 MEIS1O00470 390 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 C22orf31O95567 290 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 BRD1O95696 1058 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 VTNP04004 478 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 ATP4AP20648 1035 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 LIFRP42702 1097 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 NAPAP54920 295 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 FAM189BP81408 668 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 FAM160B1Q5W0V3 765 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 KCNT2Q6UVM3 1135 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 TRMT1LQ7Z2T5 733 aaKnown RBP10.34□□□□□ -0.75
SYNE2-209ENST00000553308 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 TMEM117Q9H0C3 514 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 IRF2BPLQ9H1B7 796 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 POMKQ9H5K3 350 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 ELAC1Q9H777 363 aaKnown RBP10.34□□□□□ -0.75
SYNE2-209ENST00000553308 RIC8AQ9NPQ8 531 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 ZNF302Q9NR11 478 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-209ENST00000553308 EVPLQ92817 2033 aa10.34□□□□□ -0.75
SYNE2-209ENST00000553308 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 SLC27A2O14975 620 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 GPR32O75388 356 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 HOXB8P17481 243 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 SREBF1P36956 1147 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 CLCN3P51790 818 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 ADCY7P51828 1080 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 CRYBB1P53674 252 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 MTMR3Q13615 1198 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF484Q5JVG2 852 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 SWSAP1Q6NVH7 229 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 TMC7Q7Z402 723 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 CKAP2LQ8IYA6 745 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 LRRC43Q8N309 656 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 TMEM105Q8N8V8 129 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF558Q96NG5 402 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 NGRNQ9NPE2 291 aaKnown RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 PUF60Q9UHX1 559 aaKnown RBP10.33□□□□□ -0.76
SYNE2-209ENST00000553308 SORCS3Q9UPU3 1222 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 NR2E1Q9Y466 385 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
SYNE2-209ENST00000553308 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 FOSP01100 380 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-209ENST00000553308 WEE2P0C1S8 567 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 PPM1AP35813 382 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF76P36508 570 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 CLK2P49760 499 aaKnown RBP10.32□□□□□ -0.76
SYNE2-209ENST00000553308 FUT2Q10981 343 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 CLLU1OSQ5K130 101 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 MIS18BP1Q6P0N0 1132 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 APOA5Q6Q788 366 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 NIPA1Q7RTP0 329 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 ECHDC2Q86YB7 292 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 ABI1Q8IZP0 508 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 SLC39A11Q8N1S5 342 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 RNF169Q8NCN4 708 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-209ENST00000553308 CASP10Q92851 521 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF668Q96K58 619 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-209ENST00000553308 LSG1Q9H089 658 aaKnown RBP10.32□□□□□ -0.76
SYNE2-209ENST00000553308 ADAM7Q9H2U9 754 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 SPG21Q9NZD8 308 aa10.32□□□□□ -0.76
SYNE2-209ENST00000553308 IGLV3-22A0A075B6J6 115 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 PRR23AA6NEV1 266 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 SMCO2A6NFE2 343 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 C2orf71A6NGG8 1288 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 IPO5O00410 1097 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 HOXA2O43364 376 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 CLASP2O75122 1294 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 ASGR2P07307 311 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 CA8P35219 290 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 METAP2P50579 478 aaKnown RBP eCLIP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 NUBP1P53384 320 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 NLRP11P59045 1033 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 KRT17Q04695 432 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 SMC1AQ14683 1233 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 RARS2Q5T160 578 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 JAKMIP3Q5VZ66 844 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 CREB3L3Q68CJ9 461 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 CES5AQ6NT32 575 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 UBALD2Q8IYN6 164 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 LRRC71Q8N4P6 559 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 LINC01465Q8N7H1 131 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms