RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GPR45Q9Y5Y3 372 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 COMMD10Q9Y6G5 202 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 MYOCOSA0A1B0GUC4 107 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 TCRBV5S2A0A599 114 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ACOT7O00154 380 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ASGR2P07307 311 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 MANFP55145 182 aaKnown RBP6.5□□□□□ -1.37
SCFD1-209ENST00000553280 SNX17Q15036 470 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ARHGAP29Q52LW3 1261 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ADGRF1Q5T601 910 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 BICRALQ6AI39 1079 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 B3GNT9Q6UX72 402 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 KCNK18Q7Z418 384 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 PHYKPLQ8IUZ5 450 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-209ENST00000553280 SLC35G2Q8TBE7 412 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 TIFAQ96CG3 184 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 LRGUKQ96M69 825 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 ANO3Q9BYT9 981 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 WNT8AQ9H1J5 351 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 SEMA4AQ9H3S1 761 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 PALD1Q9ULE6 856 aa6.5□□□□□ -1.37
SCFD1-209ENST00000553280 PRAMEF25A6NGN4 478 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SDHBP21912 280 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SRSF2Q01130 221 aaKnown RBP6.49□□□□□ -1.37
SCFD1-209ENST00000553280 GRM3Q14832 879 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 KCNA10Q16322 511 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 UGT8Q16880 541 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 CT83Q5H943 113 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 MILR1Q7Z6M3 343 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 NLRX1Q86UT6 975 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 PJA1Q8NG27 643 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 TTLL11Q8NHH1 800 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 ASB15Q8WXK1 588 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 RUNDC1Q96C34 613 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 EAF2Q96CJ1 260 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-209ENST00000553280 FOXRED1Q96CU9 486 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-209ENST00000553280 GBP4Q96PP9 640 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 CSRNP2Q9H175 543 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 CD320Q9NPF0 282 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SMG5Q9UPR3 1016 aaKnown RBP6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SIT1Q9Y3P8 196 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 ASB1Q9Y576 335 aa6.49□□□□□ -1.37
SCFD1-209ENST00000553280 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 AP1G1O43747 822 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MMEP08473 750 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MED14OSP0DP75 135 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MTHFD2P13995 350 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 PNLIPP16233 465 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 C5AR1P21730 350 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 GLDCP23378 1020 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 BRD3Q15059 726 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 VPS72Q15906 364 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 FBLN7Q53RD9 439 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 TOR2AQ5JU69 321 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 IFIT1BQ5T764 474 aaKnown RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 TMEM132EQ6IEE7 984 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 CYB5RLQ6IPT4 315 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 TIGD7Q6NT04 549 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 LCNL1Q6ZST4 164 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 RTN4RL1Q86UN2 441 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 C7orf31Q8N865 590 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 E2F7Q96AV8 911 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MAML3Q96JK9 1138 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MPHOSPH6Q99547 160 aaKnown RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 SGPP1Q9BX95 441 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 MAN1C1Q9NR34 630 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 C1orf112Q9NSG2 853 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 NUDT5Q9UKK9 219 aa6.48□□□□□ -1.37
SCFD1-209ENST00000553280 FRMPD2Q68DX3 1309 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-209ENST00000553280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 PRSS38A1L453 326 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 CTNND1O60716 968 aaKnown RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 POU2F2P09086 479 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 CLEC2LP0C7M8 214 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ZSCAN22P10073 491 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 PHKG2P15735 406 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 FAHP16930 419 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ARL4AP40617 200 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 PAN2Q504Q3 1202 aaKnown RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 PITRM1Q5JRX3 1037 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ATAT1Q5SQI0 421 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 MIER2Q8N344 545 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ARRDC4Q8NCT1 418 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 QRSL1Q9H0R6 528 aaKnown RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 POFUT1Q9H488 388 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 ZNF552Q9H707 407 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 DDX21Q9NR30 783 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCFD1-209ENST00000553280 PPP2R3BQ9Y5P8 575 aa6.47□□□□□ -1.37
SCFD1-209ENST00000553280 NUMBLQ9Y6R0 609 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms