RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 AGR2O95994 175 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CAPNS1P04632 268 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CYP19A1P11511 503 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PSMA4P25789 261 aaKnown RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 POLD2P49005 469 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 AMPHP49418 695 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PTPN5P54829 565 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SLC8A3P57103 927 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TUBA4AP68366 448 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 LACTBP83111 547 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 APBA1Q02410 837 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TFF2Q03403 129 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PLCB4Q15147 1175 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 LRRC41Q15345 812 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SHHQ15465 462 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 BBS9Q3SYG4 887 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ARSIQ5FYB1 569 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 METTL11BQ5VVY1 283 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TRIM68Q6AZZ1 485 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ADALQ6DHV7 355 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 RCSD1Q6JBY9 416 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 LVRNQ6Q4G3 990 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PPP1R21Q6ZMI0 780 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 DBX2Q6ZNG2 339 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 B4GALNT4Q76KP1 1039 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CEP68Q76N32 757 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 RSRC2Q7L4I2 434 aaKnown RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 NANOGNBQ7Z5D8 188 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CCDC170Q8IYT3 715 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 LSMEM2Q8N112 164 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PGBD3Q8N328 593 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 RNF10Q8N5U6 811 aaKnown RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ANKLE1Q8NAG6 615 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TMEM87AQ8NBN3 555 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SPC24Q8NBT2 197 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PRSS33Q8NF86 280 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 OR52K2Q8NGK3 314 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 MDM1Q8TC05 714 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 NUP133Q8WUM0 1156 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 RNF34Q969K3 372 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PPP2R3CQ969Q6 453 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 COG3Q96JB2 828 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 CEP295NLQ96MC4 621 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SAMD11Q96NU1 681 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TRERF1Q96PN7 1200 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SETDB2Q96T68 719 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 GAS2L1Q99501 681 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TRIM5Q9C035 493 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 KCTD10Q9H3F6 313 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 NCOR1P1Q9H4R4 102 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 TTC12Q9H892 705 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ANO2Q9NQ90 1003 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 BATF3Q9NR55 127 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PICK1Q9NRD5 415 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ATP8A2Q9NTI2 1148 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ZNF446Q9NWS9 450 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SRRDQ9UH36 339 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PFDN2Q9UHV9 154 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ATPIF1Q9UII2 106 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 GRID1Q9ULK0 1009 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ZNF510Q9Y2H8 683 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ZKSCAN5Q9Y2L8 839 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 GIT1Q9Y2X7 761 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 AFG3L2Q9Y4W6 797 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 GMEB1Q9Y692 573 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 SNCAIPQ9Y6H5 919 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ASTN2O75129 1339 aaPredicted RBP5.38□□□□□ -1.55
PFDN5-219ENST00000553171 ATRNL1Q5VV63 1379 aa5.38□□□□□ -1.55
PFDN5-219ENST00000553171 PALM3A6NDB9 673 aaPredicted RBP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 LACTBL1A8MY62 500 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 PIP5K1CO60331 668 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 CDC45O75419 566 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 DDHD2O94830 711 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 SCGB1D2O95969 90 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 SLC4A1P02730 911 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 BCRP11274 1271 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 U2AF2P26368 475 aaKnown RBP eCLIP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 GCLCP48506 637 aaPredicted RBP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 FAPQ12884 760 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 MAP2K5Q13163 448 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 BTG3Q14201 252 aaPredicted RBP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 TTF1Q15361 905 aaPredicted RBP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 USH1GQ495M9 461 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 ARSHQ5FYA8 562 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 PCNX4Q63HM2 1172 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 NUGGCQ68CJ6 796 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 CORO6Q6QEF8 472 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 KDELC1Q6UW63 502 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 PODNQ7Z5L7 613 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 SLC51AQ86UW1 340 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 NLRP10Q86W26 655 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 CCDC83Q8IWF9 413 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 TRIM22Q8IYM9 498 aa5.37□□□□□ -1.55
PFDN5-219ENST00000553171 CRACR2BQ8N4Y2 399 aaPredicted RBP5.37□□□□□ -1.55
PFDN5-219ENST00000553171 MTMR14Q8NCE2 650 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms