RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 GBP6Q6ZN66 633 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 C4orf19Q8IY42 314 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 GOLGA5Q8TBA6 731 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 AGPAT3Q9NRZ7 376 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 ZNF446Q9NWS9 450 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 MACROD2A1Z1Q3 448 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 GTPBP10A4D1E9 387 aaKnown RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 ENC1O14682 589 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 NR3C2P08235 984 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 GFPT1Q06210 699 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 UGCGQ16739 394 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 TXLNBQ8N3L3 684 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 GPRASP2Q96D09 838 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 OGFRQ9NZT2 677 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 LARSQ9P2J5 1176 aaKnown RBP15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 SAR1BQ9Y6B6 198 aa15.36■□□□□ 0.05
RAB3IP-216ENST00000552199 ANO9A1A5B4 782 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 MAFGO15525 162 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 PPP1R12BO60237 982 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 CCNE2O96020 404 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 UCHL3P15374 230 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 YWHABP31946 246 aaKnown RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 PSMC5P62195 406 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 ALCAMQ13740 583 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 ASIC2Q16515 512 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 MAEAQ7L5Y9 396 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 RDM1Q8NG50 284 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 CTAGE15A4D2H0 777 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 K7ENM7 598 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 TACC1O75410 805 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 USP2O75604 605 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 CTAGE8P0CG41 777 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 PLS3P13797 630 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 KLHL30Q0D2K2 578 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 MYBPC2Q14324 1141 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SH3D19Q5HYK7 790 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 ZNF746Q6NUN9 644 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 CTAGE6Q86UF2 777 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 CTAGE4Q8IX94 777 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SYCP3Q8IZU3 236 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 FAM133AQ8N9E0 248 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 PARD6BQ9BYG5 372 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 MAF1Q9H063 256 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SIX2Q9NPC8 291 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 ANKEF1Q9NU02 776 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 HOXC10Q9NYD6 342 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 TCEAL9Q9UHQ7 104 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 FBXL5Q9UKA1 691 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
RAB3IP-216ENST00000552199 SBF1O95248 1867 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 KIAA1217Q5T5P2 1943 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 MYPNQ86TC9 1320 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 CYP2J2P51589 502 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 IRF2BP2Q7Z5L9 587 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 FHOD1Q9Y613 1164 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 WDR90Q96KV7 1748 aa15.34■□□□□ 0.05
RAB3IP-216ENST00000552199 BACH1O14867 736 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 ARID5AQ03989 594 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 PRKG1Q13976 671 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 PLS1Q14651 629 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 SLC18A3Q16572 532 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 SPAG5Q96R06 1193 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 MOV10L1Q9BXT6 1211 aaKnown RBP15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 TMEM206Q9H813 350 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 ACAD9Q9H845 621 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 GCNT4Q9P109 453 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 JRKLQ9Y4A0 524 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 WDR81Q562E7 1941 aa15.33■□□□□ 0.05
RAB3IP-216ENST00000552199 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 SPDYE16A6NNV3 312 aaPredicted RBP15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 ZRANB2O95218 330 aaKnown RBP eCLIP15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 MOCS3O95396 460 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 CBX1P83916 185 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 UTP14CQ5TAP6 766 aaKnown RBP15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms