RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RIPOR1Q6ZS17 1223 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 FRMD5Q7Z6J6 570 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 RBM23Q86U06 439 aaKnown RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 EFHBQ8N7U6 833 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 NSUN6Q8TEA1 469 aaKnown RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 SPATA33Q96N06 139 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 RMDN3Q96TC7 470 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 TMEM47Q9BQJ4 181 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PHF7Q9BWX1 381 aaPredicted RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 CPVLQ9H3G5 476 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 COL20A1Q9P218 1284 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PNMA2Q9UL42 364 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PLAGL2Q9UPG8 496 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 MRVI1Q9Y6F6 885 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PPFIA4O75335 1185 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ZMYND10O75800 440 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 GGPS1O95749 300 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ITGB1P05556 798 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 FURINP09958 794 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 SMIM10L2AP0DMW4 78 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 SMIM10L2BP0DMW5 78 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 PDHBP11177 359 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 SP100P23497 879 aaPredicted RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ICAM3P32942 547 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 NOVP48745 357 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ZNF543Q08ER8 600 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 COASYQ13057 564 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 QPCTQ16769 361 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 PTPN21Q16825 1174 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 HSDL1Q3SXM5 330 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 RRP12Q5JTH9 1297 aaKnown RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ARHGEF16Q5VV41 709 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 MYSM1Q5VVJ2 828 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 PRICKLE2Q7Z3G6 844 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ADSSL1Q8N142 457 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 APBB2Q92870 758 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 NKD2Q969F2 451 aaPredicted RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 RIPOR3Q96MK2 946 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 IWS1Q96ST2 819 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 ARID3AQ99856 593 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 C16orf70Q9BSU1 422 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 PLVAPQ9BX97 442 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 LRRCC1Q9C099 1032 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 UBA5Q9GZZ9 404 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 RNPEPQ9H4A4 650 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 RC3H2Q9HBD1 1191 aaKnown RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 TOMM22Q9NS69 142 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
HOXB3-213ENST00000552000 PLXNA4Q9HCM2 1894 aa6.27□□□□□ -1.41
HOXB3-213ENST00000552000 EVPLQ92817 2033 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 MED19A0JLT2 244 aaPredicted RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 H3BRB1 525 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 PER2O15055 1255 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 ORC4O43929 436 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 CAND2O75155 1236 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 EIF3JO75822 258 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 KRT37O76014 449 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 GOLGA8HP0CJ92 632 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 GHRP10912 638 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 MYCLP12524 364 aaPredicted RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 RHOQP17081 205 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 MX2P20592 715 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 UBA1P22314 1058 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 HOXC8P31273 242 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 PTGIRP43119 386 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 RAB15P59190 212 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 RBM10P98175 930 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 CELF3Q5SZQ8 465 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 TMEM105Q8N8V8 129 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 KLHL23Q8NBE8 558 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 POF1BQ8WVV4 589 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 SUSD6Q92537 303 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 P2RX5Q93086 422 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 ACDQ96AP0 544 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 GPATCH3Q96I76 525 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 TUT1Q9H6E5 874 aaKnown RBP6.26□□□□□ -1.41
HOXB3-213ENST00000552000 TLE6Q9H808 572 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 PXMP2Q9NR77 195 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 SETD4Q9NVD3 440 aa6.26□□□□□ -1.41
HOXB3-213ENST00000552000 ENPP3O14638 875 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 FOXP2O15409 715 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 CHRNA1P02708 482 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 LGALS2P05162 132 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 ARHGAP4P98171 946 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 SP2Q02086 613 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 CDC37Q16543 378 aaPredicted RBP6.25□□□□□ -1.41
HOXB3-213ENST00000552000 FAM26DQ5JW98 314 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 ZMYM1Q5SVZ6 1142 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 TRIM50Q86XT4 487 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 MCF2L2Q86YR7 1114 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 PARP9Q8IXQ6 854 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms