RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 PTPN21Q16825 1174 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 ODR4Q5SWX8 454 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 PLPP4Q5VZY2 271 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 FAM160B1Q5W0V3 765 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 PDXDC2PQ6P474 469 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 RASGRP4Q8TDF6 673 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 MRPS27Q92552 414 aaKnown RBP24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 CASD1Q96PB1 797 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 APOL5Q9BWW9 433 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 ELAC1Q9H777 363 aaKnown RBP24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 RNF216Q9NWF9 866 aaPredicted RBP24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 LZTS1Q9Y250 596 aa24.64■■□□□ 1.54
SMARCD1-212ENST00000551966 C22orf31O95567 290 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 ADCY7P51828 1080 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 NIPA1Q7RTP0 329 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 TEX2Q8IWB9 1127 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 FAM86C1Q9NVL1 165 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 BRPF3Q9ULD4 1205 aa24.63■■□□□ 1.53
SMARCD1-212ENST00000551966 PDGFBP01127 241 aaPredicted RBP24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 VTNP04004 478 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 LAG3P18627 525 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 ZNF76P36508 570 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 PPP1R18Q6NYC8 613 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 LLGL2Q6P1M3 1020 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 APOA5Q6Q788 366 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 PLA2G4DQ86XP0 818 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 CRYGNQ8WXF5 182 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 CDH22Q9UJ99 828 aa24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 MAFBQ9Y5Q3 323 aaPredicted RBP24.62■■□□□ 1.53
SMARCD1-212ENST00000551966 IGLV3-22A0A075B6J6 115 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 FSD2A1L4K1 749 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 ADAMTS3O15072 1205 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 ST18O60284 1047 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 PBX3P40426 434 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 KCNT2Q6UVM3 1135 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 TCF25Q9BQ70 676 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 TMEM117Q9H0C3 514 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 BARHL2Q9NY43 387 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 PUF60Q9UHX1 559 aaKnown RBP24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 USP34Q70CQ2 3546 aa24.61■■□□□ 1.53
SMARCD1-212ENST00000551966 SP100P23497 879 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 AP3B2Q13367 1082 aa24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 MIS18BP1Q6P0N0 1132 aa24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 SYNE3Q6ZMZ3 975 aa24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 TRMT1LQ7Z2T5 733 aaKnown RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 BBXQ8WY36 941 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 SNX27Q96L92 541 aa24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 ESYT1Q9BSJ8 1104 aa24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 FAM217BQ9NTX9 383 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 RBM28Q9NW13 759 aaKnown RBP24.6■■□□□ 1.53
SMARCD1-212ENST00000551966 IPO5O00410 1097 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 EXOSC10Q01780 885 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 JAKMIP3Q5VZ66 844 aa24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 METTL13Q8N6R0 699 aa24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 RIPOR3Q96MK2 946 aa24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 NGRNQ9NPE2 291 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 ENTPD7Q9NQZ7 604 aa24.59■■□□□ 1.53
SMARCD1-212ENST00000551966 CYP3A4P08684 503 aa24.58■■□□□ 1.53
SMARCD1-212ENST00000551966 CKAP2LQ8IYA6 745 aa24.58■■□□□ 1.53
SMARCD1-212ENST00000551966 TCEANC2Q96MN5 208 aa24.58■■□□□ 1.53
SMARCD1-212ENST00000551966 ADAMTS10Q9H324 1103 aa24.58■■□□□ 1.53
SMARCD1-212ENST00000551966 ZDBF2Q9HCK1 2354 aa24.58■■□□□ 1.52
SMARCD1-212ENST00000551966 hCG_1984214I3L0E3 225 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 SRGAP2BP0DMP2 458 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 HOXB8P17481 243 aaPredicted RBP24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 CLCN3P51790 818 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 NLRP11P59045 1033 aaKnown RBP24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 RTN1Q16799 776 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 ECHDC2Q86YB7 292 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 LINC01465Q8N7H1 131 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 ZNF713Q8N859 430 aaPredicted RBP24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 ZNF558Q96NG5 402 aa24.57■■□□□ 1.52
SMARCD1-212ENST00000551966 H0Y858 1186 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 GFRA3O60609 400 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 CDC27P30260 824 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 CLLU1OSQ5K130 101 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 ZNF746Q6NUN9 644 aaPredicted RBP24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 TMC7Q7Z402 723 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 MRPL43Q8N983 215 aaKnown RBP24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 KREMEN2Q8NCW0 462 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 ATOH1Q92858 354 aaPredicted RBP24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 ZNF577Q9BSK1 485 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 TBC1D22BQ9NU19 505 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 SPG21Q9NZD8 308 aa24.56■■□□□ 1.52
SMARCD1-212ENST00000551966 ZBTB43O43298 467 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 KRT17Q04695 432 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 EFCAB12Q6NXP0 572 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 ZBTB33Q86T24 672 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 ZNF668Q96K58 619 aaPredicted RBP24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 GLT8D2Q9H1C3 349 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 POMKQ9H5K3 350 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 GABBR1Q9UBS5 961 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 PCDHA10Q9Y5I2 948 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 HCFC2Q9Y5Z7 792 aa24.55■■□□□ 1.52
SMARCD1-212ENST00000551966 C2orf71A6NGG8 1288 aa24.54■■□□□ 1.52
SMARCD1-212ENST00000551966 C2CD4DB7Z1M9 353 aa24.54■■□□□ 1.52
SMARCD1-212ENST00000551966 HOXA2O43364 376 aa24.54■■□□□ 1.52
SMARCD1-212ENST00000551966 EIF4BP23588 611 aaKnown RBP24.54■■□□□ 1.52
SMARCD1-212ENST00000551966 SLC39A11Q8N1S5 342 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms