RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	COL6A1	P12109	1028 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	ATP2A2	P16615	1042 aa	Known RBP	4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	ATF3	P18847	181 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	BCL6	P41182	706 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	TCIRG1	Q13488	830 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	ODF1	Q14990	250 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	PHF19	Q5T6S3	580 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	TRMT10B	Q6PF06	316 aa	Known RBP	4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	TMC5	Q6UXY8	1006 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	CEP68	Q76N32	757 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	NECAB2	Q7Z6G3	386 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZBTB46	Q86UZ6	589 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	IFNL3	Q8IZI9	196 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	MYO1H	Q8N1T3	1032 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	KLHL36	Q8N4N3	616 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	SMC1B	Q8NDV3	1235 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	NUDT10	Q8NFP7	164 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	NUDT11	Q96G61	164 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	CCDC140	Q96MF4	163 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	CLIC6	Q96NY7	704 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	NGRN	Q9NPE2	291 aa	Known RBP	4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	DTL	Q9NZJ0	730 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	CBLC	Q9ULV8	474 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHA2	Q9Y5H9	948 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855		X6R8D5	127 aa		4.08	□□□□□ -1.76
CPNE8-208	ENST00000551855	TCRBV5S2	A0A599	114 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	ARVCF	O00192	962 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	AQP7	O14520	342 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	NARS	O43776	548 aa	Known RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	F2	P00734	622 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	CPE	P16870	476 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZSCAN20	P17040	1043 aa	Predicted RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	FLT3	P36888	993 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	INHBE	P58166	350 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	GPR85	P60893	370 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	PIN1	Q13526	163 aa	Predicted RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	MLC1	Q15049	377 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	NRN1L	Q496H8	165 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	USP39	Q53GS9	565 aa	Known RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	TMEM177	Q53S58	311 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	SYCP2L	Q5T4T6	812 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	MROH9	Q5TGP6	573 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	SYDE2	Q5VT97	1194 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	CREB3L3	Q68CJ9	461 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	IQSEC1	Q6DN90	963 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	LBX2	Q6XYB7	198 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	RNF207	Q6ZRF8	634 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	OVCH1	Q7RTY7	1134 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	RIOX2	Q8IUF8	465 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	EXOC8	Q8IYI6	725 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	JPH3	Q8WXH2	748 aa	Predicted RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	EXTL1	Q92935	676 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	TOE1	Q96GM8	510 aa	Known RBP	4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	ADO	Q96SZ5	270 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	KCNJ15	Q99712	375 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	JAM3	Q9BX67	310 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	RHOBTB2	Q9BYZ6	727 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	CDH19	Q9H159	772 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	EMC7	Q9NPA0	242 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZNF180	Q9UJW8	692 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	ADAM29	Q9UKF5	820 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	NPFFR2	Q9Y5X5	522 aa		4.07	□□□□□ -1.76
CPNE8-208	ENST00000551855	PTPDC1	A2A3K4	754 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	CCDC66	A2RUB6	948 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	FZD9	O00144	591 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	TGM5	O43548	720 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	BRINP1	O60477	761 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	H2AFY	O75367	372 aa	Known RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	NPTXR	O95502	500 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	MECP2	P51608	486 aa	Known RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	PRKD1	Q15139	912 aa	Predicted RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	ATP13A4	Q4VNC1	1196 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	SLC4A10	Q6U841	1118 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	DDX53	Q86TM3	631 aa	Known RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855		Q8N1Y9	231 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	CLRN3	Q8NCR9	226 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	DIO2	Q92813	273 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	TIFA	Q96CG3	184 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	TRMT2B	Q96GJ1	504 aa	Known RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	CHAMP1	Q96JM3	812 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	PUS7L	Q9H0K6	701 aa	Known RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	FTSJ1	Q9UET6	329 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZBTB21	Q9ULJ3	1066 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZNF652	Q9Y2D9	606 aa		4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.06	□□□□□ -1.76
CPNE8-208	ENST00000551855	WDR33	Q9C0J8	1336 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	TCRBV5S4A2T	A0A5A2	114 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	DVL2	O14641	736 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	HGS	O14964	777 aa	Predicted RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA12	O60330	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	TADA3	O75528	432 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	KLHL18	O94889	574 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	FBXO21	O94952	628 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZNF202	O95125	648 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	COL6A2	P12110	1019 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	KRT15	P19012	456 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	SLC9A1	P19634	815 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	LTBR	P36941	435 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms