RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 FBXL16Q8N461 479 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 TMEM40Q8WWA1 233 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 CDCA3Q99618 268 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-221ENST00000550914 TLR9Q9NR96 1032 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 TCEAL9Q9UHQ7 104 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 TBKBP1A7MCY6 615 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 PRPF3O43395 683 aaKnown RBP14.57□□□□□ -0.08
PTCH1-221ENST00000550914 GPR32O75388 356 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 CDC45O75419 566 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 CSPG5O95196 566 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 CIITAP33076 1130 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 GATMP50440 423 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 FGD1P98174 961 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 KIZQ2M2Z5 673 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
PTCH1-221ENST00000550914 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-221ENST00000550914 BICD2Q8TD16 824 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 KCNB2Q92953 911 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 FAM167AQ96KS9 214 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 MFSD14AQ96MC6 490 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 TLE6Q9H808 572 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 LZTS1Q9Y250 596 aa14.57□□□□□ -0.08
PTCH1-221ENST00000550914 LOC730098B7Z3J9 87 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 HOXA2O43364 376 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 FGF18O76093 207 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 GLP2RO95838 553 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 LAG3P18627 525 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 TMOD1P28289 359 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 DSC3Q14574 896 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 CBX2Q14781 532 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-221ENST00000550914 PKN1Q16512 942 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 FAM102BQ5T8I3 360 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 HFE2Q6ZVN8 426 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 FAM228AQ86W67 206 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 COLGALT1Q8NBJ5 622 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 EDAQ92838 391 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 OSMRQ99650 979 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 MUTYHQ9UIF7 546 aa14.56□□□□□ -0.08
PTCH1-221ENST00000550914 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-221ENST00000550914 WDR64B1ANS9 1081 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 FSCN2O14926 492 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 VTNP04004 478 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 ATF7P17544 494 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-221ENST00000550914 PLCB3Q01970 1234 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 BMP8AQ7Z5Y6 402 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 RBM23Q86U06 439 aaKnown RBP14.55□□□□□ -0.08
PTCH1-221ENST00000550914 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 METTL13Q8N6R0 699 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 LINC01465Q8N7H1 131 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 CCDC148Q8NFR7 591 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 MICAL1Q8TDZ2 1067 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 LENG9Q96B70 501 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 AGXT2Q9BYV1 514 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 CWH43Q9H720 699 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 TYW1Q9NV66 732 aaKnown RBP14.55□□□□□ -0.08
PTCH1-221ENST00000550914 GABBR1Q9UBS5 961 aa14.55□□□□□ -0.08
PTCH1-221ENST00000550914 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 SRGAP2BP0DMP2 458 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 DUSP6Q16828 381 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 PRR16Q569H4 304 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 TMEM184AQ6ZMB5 413 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 Q6ZUG5 572 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 BRF1Q92994 677 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 RIT2Q99578 217 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 PHF7Q9BWX1 381 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-221ENST00000550914 SAMM50Q9Y512 469 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 PCDHGC5Q9Y5F6 944 aa14.54□□□□□ -0.08
PTCH1-221ENST00000550914 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 FGFR1P11362 822 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-221ENST00000550914 EIF4BP23588 611 aaKnown RBP14.53□□□□□ -0.08
PTCH1-221ENST00000550914 SFNP31947 248 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 HSPA4P34932 840 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 PPM1AP35813 382 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 USP11P51784 963 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 CLCN3P51790 818 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 NLRP11P59045 1033 aaKnown RBP14.53□□□□□ -0.08
PTCH1-221ENST00000550914 ERVFC1P60507 584 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 NHLH1Q02575 133 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 NTRK3Q16288 839 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 EFCAB12Q6NXP0 572 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 BLOC1S2Q6QNY1 142 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 SUSD6Q92537 303 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 MRPS27Q92552 414 aaKnown RBP14.53□□□□□ -0.08
PTCH1-221ENST00000550914 FBXL18Q96ME1 805 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 JAKMIP1Q96N16 626 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms