RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SYT2Q8N9I0 419 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-206ENST00000550406 DNAJB3Q8WWF6 145 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 RAD54LQ92698 747 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 CDK5RAP3Q96JB5 506 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 NOC4LQ9BVI4 516 aaKnown RBP14.54□□□□□ -0.08
RAB5C-206ENST00000550406 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-206ENST00000550406 CCDC39Q9UFE4 941 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 SMIM35A0A1B0GVV1 85 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 KIAA0355O15063 1070 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 MAGEB2O15479 319 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 PLA2G4BP0C869 781 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 PFKFB1P16118 471 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 CLCN3P51790 818 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 RRAGBQ5VZM2 374 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 RINT1Q6NUQ1 792 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 C1orf186Q6ZWK4 172 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 RPAINQ86UA6 219 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 RUSC1Q9BVN2 902 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 FAM49AQ9H0Q0 323 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-206ENST00000550406 SUGCTQ9HAC7 445 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 TMEM39AQ9NV64 488 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 KCNH3Q9ULD8 1083 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
RAB5C-206ENST00000550406 ARHGEF35A5YM69 484 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 POLR2DO15514 142 aaKnown RBP14.52□□□□□ -0.09
RAB5C-206ENST00000550406 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.09
RAB5C-206ENST00000550406 DGAT1O75907 488 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 CKBP12277 381 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 CYP11B2P19099 503 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 TXLNAP40222 546 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 RFC5P40937 340 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 NDUFA8P51970 172 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 RBL2Q08999 1139 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 GPNMBQ14956 572 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 EMC2Q15006 297 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 ZNF618Q5T7W0 954 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 CCDC73Q6ZRK6 1079 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 METTL13Q8N6R0 699 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 TET1Q8NFU7 2136 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 MRPS27Q92552 414 aaKnown RBP14.52□□□□□ -0.09
RAB5C-206ENST00000550406 DPF3Q92784 378 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 TMEM143Q96AN5 459 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 MTRQ99707 1265 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 FAM13BQ9NYF5 915 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 NOD1Q9Y239 953 aa14.52□□□□□ -0.09
RAB5C-206ENST00000550406 NPHP3-ACAD11A0A0J9YXS1 232 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 EVI5O60447 810 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 CHRNA1P02708 482 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 CYP2C18P33260 490 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 ARL2P36404 184 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 THPOP40225 353 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 POLGP54098 1239 aaPredicted RBP14.51□□□□□ -0.09
RAB5C-206ENST00000550406 MGAT3Q09327 533 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 TMEM62Q0P6H9 643 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 DHX8Q14562 1220 aaKnown RBP14.51□□□□□ -0.09
RAB5C-206ENST00000550406 TAF2Q6P1X5 1199 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 ENGASEQ8NFI3 743 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 RASSF8Q8NHQ8 419 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 LARP4BQ92615 738 aaKnown RBP14.51□□□□□ -0.09
RAB5C-206ENST00000550406 STAMQ92783 540 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 DHX58Q96C10 678 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 VWCEQ96DN2 955 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 WNT8AQ9H1J5 351 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 CDHR5Q9HBB8 845 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 LMBRD1Q9NUN5 540 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 STK17AQ9UEE5 414 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 SERTAD1Q9UHV2 236 aa14.51□□□□□ -0.09
RAB5C-206ENST00000550406 MYMKA6NI61 221 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 ACTN4O43707 911 aaKnown RBP14.5□□□□□ -0.09
RAB5C-206ENST00000550406 GPR32O75388 356 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 PRPF40AO75400 957 aaKnown RBP14.5□□□□□ -0.09
RAB5C-206ENST00000550406 TIMP1P01033 207 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 VTNP04004 478 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
RAB5C-206ENST00000550406 SYN1P17600 705 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 LIG1P18858 919 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 STAT6P42226 847 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 MAPK7Q13164 816 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 SNW1Q13573 536 aaKnown RBP14.5□□□□□ -0.09
RAB5C-206ENST00000550406 MBTPS1Q14703 1052 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 LONRF3Q496Y0 759 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 FAM26DQ5JW98 314 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 IER5Q5VY09 327 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 MAEAQ7L5Y9 396 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 KSR1Q8IVT5 923 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 FMR1NBQ8N0W7 255 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-206ENST00000550406 DAW1Q8N136 415 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 NME8Q8N427 588 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 CAGE1Q8TC20 777 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 ASAP3Q8TDY4 903 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 SLC7A3Q8WY07 619 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 PPP1R12CQ9BZL4 782 aa14.5□□□□□ -0.09
RAB5C-206ENST00000550406 HIPK3Q9H422 1215 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms