RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 CLCN3P51790 818 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ZXDAP98168 799 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 UBE3AQ05086 875 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ZNF484Q5JVG2 852 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ADAMTS10Q9H324 1103 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 TLE6Q9H808 572 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 C1orf112Q9NSG2 853 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 USP34Q70CQ2 3546 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 ZNF862O60290 1169 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 CRYBB1P53674 252 aaPredicted RBP13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 TCF15Q12870 199 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 PPP2R3CQ969Q6 453 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
SMARCD1-208ENST00000550280 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 GPR182O15218 404 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 ATF7P17544 494 aaPredicted RBP13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 ZNF76P36508 570 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 UGCGQ16739 394 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 PLPP4Q5VZY2 271 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 MIS18BP1Q6P0N0 1132 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 LRRC71Q8N4P6 559 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 MICAL1Q8TDZ2 1067 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 ZNF577Q9BSK1 485 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 PCDHB12Q9Y5F1 795 aa13.14□□□□□ -0.31
SMARCD1-208ENST00000550280 KMT2EQ8IZD2 1858 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 NID2Q14112 1375 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 FGFR4P22455 802 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 CIITAP33076 1130 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 GJA10Q969M2 543 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 PBXIP1Q96AQ6 731 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 TMEM117Q9H0C3 514 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 GABBR1Q9UBS5 961 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 LZTS1Q9Y250 596 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 EVPLQ92817 2033 aa13.13□□□□□ -0.31
SMARCD1-208ENST00000550280 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 LAG3P18627 525 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 RCAN1P53805 252 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 NLRP11P59045 1033 aaKnown RBP13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 DRP2Q13474 957 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 NTRK3Q16288 839 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 PRR16Q569H4 304 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 METTL13Q8N6R0 699 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 KCNB2Q92953 911 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 PCDHA10Q9Y5I2 948 aa13.12□□□□□ -0.31
SMARCD1-208ENST00000550280 MSH4O15457 936 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 STBD1O95210 358 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 SP100P23497 879 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 TECP42680 631 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 GPC3P51654 580 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms