RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 KIAA0825Q8IV33 1275 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ZFPM1Q8IX07 1006 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 IKZF4Q9H2S9 585 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 GAKO14976 1311 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 PVALEFA0A1B0GWK0 134 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 LCA5LO95447 670 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 LRRC14Q15048 493 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 EXOC3L4Q17RC7 722 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 CCDC65Q8IXS2 484 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 IQCDQ96DY2 449 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ELAC2Q9BQ52 826 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 NR2E1Q9Y466 385 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 CAND2O75155 1236 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 NEBLO76041 1014 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 HSPA9P38646 679 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 SCTRP47872 440 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 SMTNP53814 917 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 NFIAQ12857 509 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 PLS1Q14651 629 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ZNF572Q7Z3I7 529 aaPredicted RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 FUKQ8N0W3 1084 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 THOC1Q96FV9 657 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 ARMCX3Q9UH62 379 aaPredicted RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 PTPN22Q9Y2R2 807 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 SHBGP04278 402 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 ELF1P32519 619 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 CASP5P51878 434 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 TTBK2Q6IQ55 1244 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 VPS36Q86VN1 386 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 CCDC125Q86Z20 511 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 PSMD1Q99460 953 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 FMO2Q99518 471 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 STK38LQ9Y2H1 464 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 MMEP08473 750 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 PLA2G4BP0C869 781 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 UCHL3P15374 230 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 SNAP25P60880 206 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 ANKRD20A8PQ5CZ79 823 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 AADACL2Q6P093 401 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 SLC30A10Q6XR72 485 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 GLYCTKQ8IVS8 523 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 RUBCNQ92622 972 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.68□□□□□ -0.549e-7■■■■□ 24.4
SMARCC2-208ENST00000550150 PLCB1Q9NQ66 1216 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 NAGPAQ9UK23 515 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 PCDHGC5Q9Y5F6 944 aa11.68□□□□□ -0.54
SMARCC2-208ENST00000550150 LRRN2O75325 713 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 FLOT1O75955 427 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 IKQ13123 557 aaPredicted RBP11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 NUCKS1Q9H1E3 243 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 L3MBTL1Q9Y468 752 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 CHN1P15882 459 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 USP11P51784 963 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 CUL1Q13616 776 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 PPP4R3AQ6IN85 833 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 GCNT4Q9P109 453 aa11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-208ENST00000550150 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms